FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635348

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635348
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCCGAGCCGGAGCCTCCCGCCAGGGCCGAGGACCACCACTGGCGTCGC28.695652173913043No Hit
GGTGCTCACCCGCCCCGTGCAGGGTCTGCCGCTCATCCACGTGGAGGCGC28.695652173913043No Hit
GGGATCTCACGGATCAGGCGGAGCGCCGCCTCGCGAACGCCACGCAGTTC28.695652173913043No Hit
CGGTGCTGGTCACCTCCATCCTGGTCCTCGTCGTCTTCCCCGTGCTCGCC14.3478260869565215No Hit
GCCCCACCCTGTGGCTGAGCGCGGCGATCCACGGCGACGAGGTCGTCGGC14.3478260869565215No Hit
GCTCATCACCGACGTGGTCGATGCCGATGAGGTCGGCTCGGCCTTCCGAC14.3478260869565215No Hit
CCCCTGAGGGACCGGCCGGCGCGCCGCCAATGCTGAGGAGGAGTCCCTGC14.3478260869565215No Hit
GGTTGAGGCAGTGCTCGCAGATGCGCGGCAGGTAGAACATGAAGGTCTCT14.3478260869565215No Hit
CGCCACCGTCGTCGGCACCCTCATCGCCATGCTCGCGCTCAGTCCGACGT14.3478260869565215No Hit
GGCATACCTGGGGCAGAACGCCGCGCCCCCGCGTCAGCACCCGGGGCGCT14.3478260869565215No Hit
ACGCCGAGGAGGACGTGCCAGCGATGCTGCGCGCGGTCTACCGCTACCAC14.3478260869565215No Hit
GTACGAGGACCGGTACGTCATCCCCGCTGCGCACGGCGAGGAGGCGCATG14.3478260869565215No Hit
CTCCGCACCCCGGCCGACGAGACCCCTCGCACCGCGGTGGCGCTGGCCTC14.3478260869565215No Hit
ATGCAGTACATCGAGATCGTCGAGTTCCCGAACCTCATGGGCGAGGACGT14.3478260869565215No Hit
GGCCTATCCGGACAGCTCTCGTGCCGCACGGGTCGGCCGCTTCAAGGCAT14.3478260869565215No Hit
CAGGCCCGGGCCGCCAGCGGTGGGCGGCTCACGCCGGAGCTGCTGCGGCT14.3478260869565215No Hit
CCAGAAGGAGAACGATGACCGACGCACCCACCCGGCTCTTCCTCGTCGAC14.3478260869565215No Hit
GCGGCAGGTATCTCCGTCGCGACCGACGTGGACCACCGCCCGGCCGCCGA14.3478260869565215No Hit
ATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATA14.3478260869565215No Hit
GGTCAGGACCGCTCTTCTCCTCGCAGGACTCTGCATGGTGATCGCCGGCG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)