FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003635365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGCCTCGATAGGCAGCAAACGAATCTCACGGCCGATGCAGCGACGTTG64.25531914893617No Hit
GTGTGCCTCCACGCTGTCGGCTCCCGCGGCCGCAGCGGAGTCCGCCAGTG53.546099290780142No Hit
CTTCCCTTCAAGGCAGTGGGCTTTCTTCCTGCTTGAAGTGTGTTTTCAAA42.8368794326241136No Hit
CCCCATGGACTGGACAGCAGCCACTGCAGGATTGAGGGCTAAAACCCAAG32.127659574468085No Hit
GGGAGGGGAGGCTGAGTACCTTCACTGCTTCTGCTTCATAGTCTTAGGTG21.4184397163120568No Hit
GCCTCGGCCCGCTGGCCAAGGTCCTCAACGACGAGTTCGGCATCGTCAAG21.4184397163120568No Hit
GTTTATTACCAGCGCCTCCGGTCTGGGTATGTTGCTGATGGTCACCTTAT21.4184397163120568No Hit
GGCTTGCGAGTTTCTCACATCTTGCATCCTACATTAGGTTGTAGGACAGC21.4184397163120568No Hit
TTAATTCGCTACGCCCCGCCCCTACCAGACCAAACAGCCCAACAATTTCA21.4184397163120568No Hit
TCACGAAGCGGAAGATTCGCGCTATCGCGCGCGCAACCGGCCGCAACGCC21.4184397163120568No Hit
ATGCGCGTCAGGCGGCGTCGGAGAACACGTTGAAGGCCTATGCCAAGGAC21.4184397163120568No Hit
GACGGGATCTTCATGAGGGCCGCAAGACGCACCGACGGACGCATGTAATC21.4184397163120568No Hit
ACATTATCTTATGGTAGGATTTCCAGCATGTCTGGCAATCCATCCTACCC21.4184397163120568No Hit
ACGCAGAGGTGCTGGACAAGGTCTTCCCTGCTGCACAGAAGTACCTGGCG21.4184397163120568No Hit
GTAGACGCCTTCGCCCATGCCGTGCAGGCGCTGCATCTCGAAGGGCGCGT21.4184397163120568No Hit
CCCCGACGCCCGCCGAACTGGAAAACGCCAAGGCCCGCTTCCTCGGCAAG21.4184397163120568No Hit
CCAAGATCATGCAATCATGACACTGCACTCCAGCACTGCAGCCTGGGCGT21.4184397163120568No Hit
GTGCTGACCACCGAGAACGATGAGCAGGCGGAAGTGCGCATGGCCGAGAA21.4184397163120568No Hit
AGCCCGAATCGCCCACCAGGCCCGAGATGCCCGCGACGCCCGAACGGCCG21.4184397163120568No Hit
TCATCGCCATGGCCAACGCCGCCGCCAAGCTGGTCGCGGAACACAACCCC21.4184397163120568No Hit
GCTGAACGCGTCGCGGTTCAGCATCTTGCGGTTCTCGGCGGTCAACGGGC21.4184397163120568No Hit
CCCCGCGACATGCGCCCATTCTGCTCGCGCGACATCTTTGGCATCGCGGG21.4184397163120568No Hit
GTCCACGGCTTCGGTCTCGTTTTCGACGAGCACGTCGATCACGCCATTCG21.4184397163120568No Hit
GTGGGGACCTAGTGAGGTGCTCTGTGTCTCGAGTTTGGTACATTCCCAGG21.4184397163120568No Hit
CTCTTGGTGCGCCTGCGGCATAAGCGTCTCGCAACTGGTGTCAGGCGCGC21.4184397163120568No Hit
CATCAAGGTCTCCGATGGTGTCATGACATGGTCGATCTCACACATCGTCG10.7092198581560284No Hit
CTCCCACCACCTCGGGCGGCAAGCGCCGTTTCGCGCGCATCGACCGCCTC10.7092198581560284No Hit
CTACTAAAAATACAAAAATTAGCTGGGTATAGCCGGGCGCGGTGGCTCAT10.7092198581560284No Hit
TCTGCCACCAGCTGGCTGTGTGACCATTGGGAAATCACTCTACCTTTCTG10.7092198581560284No Hit
GGTTCGGGCTGTGATGTGAGTGCCAAGCTGTCCTCGTATTCCGCCTTCCC10.7092198581560284No Hit
GTCATCGCGTGCCAGGGCGCGCGGCAAATCCAATTTACGGTGCCCGAGCC10.7092198581560284No Hit
GTTCCAAGAAGGTGCGAAGACATTCGTGAGCTGGATGGGAAGCATCGTGC10.7092198581560284No Hit
TCAATGACCTCGCCAGTCTCCTCGACTAGATAGGTCACCAGGGATCGATG10.7092198581560284No Hit
GTTTGCATTCAACTCATAGAGTTGAACACTTCCCTTCATACAGCAGGTAT10.7092198581560284No Hit
CAATAACCTTGGCGGGGGCCGCGCCCGTGGTGTCCTTGCCATCAATGCGG10.7092198581560284No Hit
TCGCAGCCCATCCAAGGATTTAAAAAGCGACGAGGCAAGGCCTGAGCTCC10.7092198581560284No Hit
CTGCACAAATACACCACGCCGGAAGGCGAGCGCCGCGTGCGCGTGCAGGC10.7092198581560284No Hit
GATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGC10.7092198581560284No Hit
CCATCAGTGCTGCGCAGAGCGCGGCGTTCCCGCCCCCGATGACCAGTACG10.7092198581560284No Hit
CGTTATGTTGGTTCTTACTTAGCAGAATTGAATGGCGCAGATGCTATCGT10.7092198581560284No Hit
CATCTATTACAAATGGAGTATTTATTTCTAAAAGTCTATTAGAGCAGTCC10.7092198581560284No Hit
GTACCGGGAGTTCAGTTCTCGTCAGGAATTGCAGTTGGCCGCAATTGCGG10.7092198581560284No Hit
GGTTGGAGTATTTGCCCCTCCTCTAGAAAAGCAGGACTTGCCGCTCAGGG10.7092198581560284No Hit
GCACCTGAATCTTGCGTTTGTCGTTCATGTTCGGGGGGCAAGTTTCAGGG10.7092198581560284No Hit
TGCGAGAGGTGCATGGCCTGCGATGGTGGCAGTGGCTGTGGCAAGAGAGC10.7092198581560284No Hit
CATCTCATAGAGGCCTCAGCTGAAGGGCACAGAGAAGGTAGGGTGGGGTT10.7092198581560284No Hit
ATACAACTTAATGGGGTTTCAAAAGAGTATGTCTGGAATGCATGAAATCC10.7092198581560284No Hit
CTGTACGCTGGTGCGCGGGCCTTCCTGTACCCTTCGGTGTATGAAGGCTT10.7092198581560284No Hit
GACATACACCCCGAGAGAAGGACGCCTATGGCACCGGAAGCACATGACGC10.7092198581560284No Hit
GTGATGCACGTGCCGTTCCCTGAGCCGGCGGATGCCTCGCCGTGGCGCGA10.7092198581560284No Hit
TTATATCTCAAAGGATCCAGAAAGCTGCCAGTTGAAGTGGTGGCACCAAG10.7092198581560284No Hit
ATATCTAACTGAGTCAAGAGTTTGAAAGCACCATCCACTGGACTCTGCCC10.7092198581560284No Hit
GCCGCTCAGGTCGCGGCGGTCACGCCCTTCGAGCGGCGTGTCGTCACCGC10.7092198581560284No Hit
GCTGAAACACAAGNTCAGCAAACAGGAAGGACCTGAGGTCCACTGGGACA10.7092198581560284No Hit
CCAGGACTTCATCAAGCATCTGTAAGTGCTGTAAGTCATGAGACAAACAC10.7092198581560284No Hit
GTAGGGAGGGGTGGTTCTTTCCCCAGGCCACCAGCACAATGCTCAAATTG10.7092198581560284No Hit
GGCCAGATCCGCGTCAAGACCCGTGCTGAACTCATCGCCGGCTGGGACGA10.7092198581560284No Hit
CAGTACGCTGGTGCGCGGGCCTTCCTGTACCCTTCGGTGTATGAAGGCTT10.7092198581560284No Hit
GAGTACAATGGAATAGAATGGAATGGAATGGAATGGAATGGAATGGAATG10.7092198581560284No Hit
ACGTTGGGGTCGTTTCTGCGCGAGTTCCGGTTCGGGCATGTCCGGCAATT10.7092198581560284No Hit
AACCGCTAATGCTCCAGGGCAAGGCAGGGTAGGTGAGGCACATGAACGGA10.7092198581560284No Hit
GCCAGAATGTATGGTCACCTTTCTCACTGATCTTCTCAGGCTGACTTAGG10.7092198581560284No Hit
TTGTAGTATAGTTCGAAGCCAGGTATCATGATGCCTCCAGCTTTGTTCTT10.7092198581560284No Hit
GTCGGTGTGGGATAACGGCACCACCCCGGTGACCGCTCTTGTTAACGCTC10.7092198581560284No Hit
GTGCTGGAGGACCCGTCCAACAACCGGAGACAGCACGCCGGAGACGACAG10.7092198581560284No Hit
CACTGGAGTTAGATTAGACTGGTAAGAAACTCATTGTATTTTAAGAGACA10.7092198581560284No Hit
GGCATGGAGCGCGCGGACCTGCTGTCGGCCAACGCCCAGATCTTCACGGC10.7092198581560284No Hit
GCTGTTTTAACTCTGTATCCTGATGCAATTGTGATCGCTGCTGATACCAG10.7092198581560284No Hit
TGCCGCCGATGAGCACGGCGAGGAGCGTGAACGAGACGAACACGAGCGGG10.7092198581560284No Hit
ACCAAAGACAACCCCGATAACCAGAGCCCATAGCATGCCCTGATAGGTAT10.7092198581560284No Hit
ATGAATGTCTTGCCAAAGGAGCTGACAGGAAGTAGAAAAGCACCCATTGG10.7092198581560284No Hit
TTACCACAGTATAAAATAGAGAAATCACTTTATAGATACCCAGGGAGGAA10.7092198581560284No Hit
TCACTATGTTGATCAGGCTGGTCTTGAACTCTTGACCTCAGGTGATCCCC10.7092198581560284No Hit
GTGTTTACACATATGTCTGCATGCATGTGAACACACACACACACACACAC10.7092198581560284No Hit
TTATATATGTGTGTGTTTCACATGAAAGAGAAGTTTCAGAAGCAGGAGAG10.7092198581560284No Hit
GTGTGGAACCTTTCTTTGATAGTTCAGGTTTGAAACACTCTTTTTGTAGA10.7092198581560284No Hit
CGACACCCCACTGGTCGAAGGAATCGATACCCCATACGACGCCCTGCACG10.7092198581560284No Hit
GTGCGAAAACTGTCCCCATTTGGTCACGCAAGCGGCCGGGCCCGCGCCTG10.7092198581560284No Hit
GGTCGGAGCTTTCTTCGTGATGATTGTGGCAGCTGCTGAGGTGGTTGTCG10.7092198581560284No Hit
CACCCGGAGTGGTTTTGAGAGACTGGGAATCGCCAAACCCCCTGTCCAAA10.7092198581560284No Hit
TACGCGCACACACACACAAAATCTATAGGAAAAAGTCACACAAGTATACA10.7092198581560284No Hit
TCGCCGTACATCTCGGCGGTGTCGATCAGGCGCAAACCCAGGTCGAGGCC10.7092198581560284No Hit
ATCCTGGTATCGGTCTGCGATTCCGACTCGTCCAACATCAATACAACCTA10.7092198581560284No Hit
GACTTGAAAGGTCCATTCTTTTGTCATCTTGCTGGTTCCCTTAACAAGAC10.7092198581560284No Hit
TTCGTAGACATGGCGCATCAGGTCGAGATAAGGCTTCATGCGAGCGCAGG10.7092198581560284No Hit
CTCAGATTTTAGTCTCTGAATTCCATTTTCTTTTAAAAGAAACTAGAGCT10.7092198581560284No Hit
GGCTAGAGTCAAATCTTTTTATTGCCTCCTGAACGGCACAGTGGCCACAG10.7092198581560284No Hit
TACTTATAGTTACCTCAAATCTCTGAGCAGTCTCATACCTCCAGGTTTTT10.7092198581560284No Hit
CCCCTGCCTCTGGGCTTTACTCACTCTGTTCCCCCTCCTGGCCTGCCCTT10.7092198581560284No Hit
GGACACGGCCGCCACGCCTGCAGCCACGCTTGACCCGTTGTGGATTCGCT10.7092198581560284No Hit
GGATTAGTGAAGGATAAATAAGGACCCTCCTCTGTCCTCTAGTTTAACGG10.7092198581560284No Hit
ATACTCACTGACCCGCTCAACATTATCGGTAGCTAAGGTAATGACTCGTT10.7092198581560284No Hit
GAAGGATTGACACCTAGCATCTGTGTGTCATTCATTAAAACATGCCCTGT10.7092198581560284No Hit
AACCCGCCTAGTTCGTGTGCGCCCGGAGGACCTGGCGGCAGGCGGTATGG10.7092198581560284No Hit
ACTCCGTGCGCTTGGACACGTGGTAGAACACCGAGCCGTACAGCGTGTTC10.7092198581560284No Hit
GCCTGAAACTCACGCTGCTCTGGTTGCTGCTGCCGGGGCTGGTAGGTGTG10.7092198581560284No Hit
ATATTATCTCCCTTCTACCATTCGACGCCAGGGAGATAATGACTGTCCTG10.7092198581560284No Hit
CAAAGGGGATCACGCGCCTGCCGCGTGCCGACAAGCTGACGCTCGCGCGC10.7092198581560284No Hit
GTAAGTCTGTCCCCTTCTTACTTGATATAGGGGCTACCCACTCCACATCA10.7092198581560284No Hit
AGACGCGGCAGTACTGGCGGTAGCGCGCCGCCTGGTAGCGGGCGATGGAC10.7092198581560284No Hit
GCAGATGCTGGCAGCCATCACAGGACAGTCGGAGCGCCTGGCCGACAACC10.7092198581560284No Hit
CCTCTAAACATTGCGGAAGGATATGGAAAGAAAGATTCAAGTGCTGATTT10.7092198581560284No Hit
GCTCTAGAGAAGAGCAGGCCTCACCTGCAGGGGCACAGCATTTACCTCTA10.7092198581560284No Hit
CGCACGCGGGAAGCGCCTCAATCGTGCCGGTCGCAGCCGCAGCCCGGTCC10.7092198581560284No Hit
GCATTCGCTGCAACGACATTGCCCCCGTTTATCTCACGCAGCGCATGTGA10.7092198581560284No Hit
CCGTTAAAGCAAAAACAGTATCTTAGTTCTCAATTGGTTTCACATGTTGG10.7092198581560284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)