FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATCTCCTCGACCTCGGCGGGTAGTTTTCCAGCCGGTTGCTCCTCGCACA27.142857142857142No Hit
GGTAAAGAGGACTACGTAGTCCACTGCGACTCCGTCATTCTCGCCGCCGG27.142857142857142No Hit
CGCGAGGAGAGGTCATGACCGTTTGGGACGACGCCACCGTACGGGAACGC27.142857142857142No Hit
GCGAAGACCAGCGCTGACCCGACGAGGAAGCGTTGCCTCGGGCGGCGGCT27.142857142857142No Hit
CCGCATCGCCGCCCCCCGCCGATCCCTGTCGCGTAAGCCACGCCGTCGTC27.142857142857142No Hit
GGCACATACGACCGTAGTGCGACGGGTGAACGTCACGGACCTCCATGCCG27.142857142857142No Hit
CGGCTACTCGCTGTGGATCTTGGTGTGACTACTTCGACCGCTGGACCTTT27.142857142857142No Hit
GTGCCGCAACAAGGCCGCCGCGTTGCTGGCGGCGATCCCGGCGTCACGCC13.571428571428571No Hit
CGTCGAAGGTGACGTCGATGAGACCGCCGTCCTTGAAGGCGGCCGATTTC13.571428571428571No Hit
GCCTTTGTTCTTAGCAGCAATAAGAGAGACCACTCTGGTGCGCATTGCGC13.571428571428571No Hit
GTCCGAGTAACGTTGATGGCTCGCGGGCCGAAAGTCTGCCCCTCCGACAG13.571428571428571No Hit
CCACTGTCTCATGCATCGTCAGTCCGACGACGATCCACACCAGAACGGCG13.571428571428571No Hit
GGTTGGAACCCGACCGCACACCACCGTGCTCGCGGCGAATCCTTAGTCAG13.571428571428571No Hit
CTCAATAGTTCTGACCAGCGGGCCGTGGCCGACTGTTTTGACCTCGTTGT13.571428571428571No Hit
GTTCCTTGAGGAACTGGACGAGCTTTATCCGCTGGAGCTCACCGCCAGAG13.571428571428571No Hit
GGCAAGGGCGACAAAGAACGCACCGTGCCTATGGGCGCCTGCGCTGCGTG13.571428571428571No Hit
AATCACCGGCGGGGTAAGCGTGCCGTAATAGCCACGCCCAATGAGGGCAC13.571428571428571No Hit
GACGGGATCCTGCTGGTTCCCGGTTATGAGGCCATCGCCTTCGCCCGTCG13.571428571428571No Hit
GTCCATGACCCGCGCCAGGAAGGACAGATTGTCGTGGATGTCGGAATAGC13.571428571428571No Hit
GACCTTGCCGAACACCTTTCCGCCGCTCACATCGTTCACGACCATAAGGT13.571428571428571No Hit
GCGGCGTGGTCGTCGGCACGGTCGAGGATGACGTAGGCCCGGTTCGATTC13.571428571428571No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)