FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAACTTTTACCCAAGCCCCAGCATCGGCGGCGGCCAAGGCTGTCGTG27.142857142857142No Hit
GGGTTGCACCGTAGAGGTCTTCGTTGGCAACACGGTGGCCGTTGGTGCCA27.142857142857142No Hit
CGGTAACCGTCGTTTGCGTACCGTCGGCGAGCTGATCCAGAACCAGTTGC27.142857142857142No Hit
CTGGCAACTGTCTCGGATCCGGCGATCCATGCTGACATCGTTGCTCAGAT27.142857142857142No Hit
TCACTGAAGTGGCCAACGACATTGCGATCGCCACGATGGCCAAGGTCACT27.142857142857142No Hit
GAAGCGCTTAACGAACCGAACCGGCTCAGGGGCCGCTCGACGGCGATGCA27.142857142857142No Hit
GTCCTGAATCAGGCGAGTCGATTGAAGGCGCGCGTCTGGGTTCTCGAGAA13.571428571428571No Hit
TCACCATCGCGCTGATGGCCCGCGAGGAGTTCGAACTGGGCGCCGAGGCG13.571428571428571No Hit
GCCCAGCAGCACCCGGAAGTCACCATCATCGATCAATTGCCACTAGCAGC13.571428571428571No Hit
TCGCTGTTGACACCAAGATTAAAAAACACGAGGGCGACGACGCCACAGGT13.571428571428571No Hit
TCACCATCGCGCTGATGGCCCGCGAGGAGTTCGAACTGGGCGCAGAGGCG13.571428571428571No Hit
CGTTGGATCACGTCGACGGCGAGCACTTGGGCAATGCCACTTCAACGTTG13.571428571428571No Hit
GGCTCCAAGAGAAAGCTCCATGCCGACGCCCCGACCGCGAGCGCGGCGAC13.571428571428571No Hit
ACGTAACCCGTGAGGCCCAAGGTCGGGGGAGTCTGGTTCGGCACGCAAGT13.571428571428571No Hit
CCTCAACCGCACCCTGGTGTCGGCCATGTGCCCGAGACGCTCGCTCCGGT13.571428571428571No Hit
GCTCGGCCCACTCGGGGGCTGGGTCAATCTGGCAGGTAGACGCTGCTCTG13.571428571428571No Hit
GCCTCTGTGCTCGACTCCAATGAGGGGGACTCCTCCGTTCGCACCCCGAG13.571428571428571No Hit
GGTACCACGTGCCTTCCCCTGCAGTGGTGCGGTACGGACTTATCGATAAC13.571428571428571No Hit
CCCCAAACGATGCCGGTCATATACCTCACGAATATGTCCTCAATCGAGGA13.571428571428571No Hit
CGTTGAAGCCTGGCCCCGAAATCACCCTGTCCGACGGGTCCATGGCAGGC13.571428571428571No Hit
ACATGCAAGGGCAACAACCTGTCCGGTCTCTTCGACGCCCACGGTAGCCC13.571428571428571No Hit
GGTTTTCCGGCGCCCTATGGGTGCCTTCGGAGTTGTGTGCTACGGCGGCC13.571428571428571No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)