FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003635461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTACATTTGGACACAGCAAGGTCAAAACTTTGCCATTGAGATTGCA23.7735849056603774No Hit
GTCCCTGGGTTGCCCATTCTGGTCCAGTGGTTTTCAACCTTTTAGGGGCT23.7735849056603774No Hit
ATCCCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGAG23.7735849056603774No Hit
GCTCTCGACCGCAATATCCTTCGGAATAAAGTACGCACCGGTTTCATTCA23.7735849056603774No Hit
GCCCGCGCCGCGTTCCCCGTCGCGCGGCCGACCGTCCGCAAGCTCGCCGC23.7735849056603774No Hit
CGCACTCATGCTGCGCCACGCTCCTCACTCGCCGCTAGCCGGCACCGCCT23.7735849056603774No Hit
CTGTAATCCCAGCTACTGAGGCAAGAGAATGGCTTGAATCTGGGAGGCAG23.7735849056603774No Hit
CATAATCTCGGCTCACTGCAACCTCCATCTCCCAGGTTCAAGTCATTCTC23.7735849056603774No Hit
GTCCCAGCTACCTTGGGAGGCTGAGGTGGGAGGATCACCTGCTTTTGGGA23.7735849056603774No Hit
CGCCAGAGTCGCCCCCGGCACGGCCACTGCGGCCGCCGGCCCCGTGGCTG23.7735849056603774No Hit
ACACCGAAGTGCCCAAGCATGTTCGACGCTTGGGCACTGTCGGGCTTGTT23.7735849056603774No Hit
GTTAAGGTGCATCTTATAAGCATTAGGAAAGTCATGATTGATTTGCTTGG11.8867924528301887No Hit
GTGCACCACGGGCCCGCAAGAATGCGGGAAAGATCTATAACACGGACTCC11.8867924528301887No Hit
TGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTCA11.8867924528301887No Hit
CCTGGGTCCCCAAATGACTCACCCAGCACCATTTTGTGAGTGAGAAACAA11.8867924528301887No Hit
CCCTGAGGATAAAGCTGTTAATACTACCCAAGCTCCAAATCAGGTCAAAT11.8867924528301887No Hit
GTCGGGCCTCGGGTGGACAGGTATAAATGTGTGAGGCAGTCGTGTTTGTG11.8867924528301887No Hit
ATATTATATAGTCCAGCTAATTGACATGGCCCAGCAGACTGCCCAGGGCA11.8867924528301887No Hit
ATTCCATTCCAATCCATTCCATTCCATTCCATTACACCTGAGTTGATTCC11.8867924528301887No Hit
GGCCACACTGGCACCCCGGGAGGCGGGGCGCAGTGTCGCATGACGTAGAA11.8867924528301887No Hit
CCTATAATCCTAGCACTTTGGGAGGCTGAGGCGGGTGGATTACTTGAGCC11.8867924528301887No Hit
ATGAGCTAGATTTCTGCAGGAAGGATATTTCATTTAATGTTCACAAAAAT11.8867924528301887No Hit
CCACTATACTCCAGCCTGGTCTCACTCTGTCACCCAGGCTGGAGTGCATT11.8867924528301887No Hit
CAATTGAAACGTGTTCACTGATCATATTTTTAATGTATCTTAGTACAGTT11.8867924528301887No Hit
TCTAACTAGTTCCCTCATGATGGTGATGCCACTGGTCTTGGGATCTGTCT11.8867924528301887No Hit
CTCTCCCTCCTCGGCTGCGATGCCGAGCCTGTCCAGCGCGGCGACGATAA11.8867924528301887No Hit
GGGTTGCCATCCAACAGGCTTTGGGCCTTTTACAACAAGAACTGGATGCA11.8867924528301887No Hit
CCTGCCTTAGCCTCCTGAGTAGCTGGGATTACAGGCAGGCATCACCACGC11.8867924528301887No Hit
GCTGGCCACATATATTGTTTGTCACACTTCCCATAGAGAGTTGGAGTCTC11.8867924528301887No Hit
GGTTGATTCCATTGAATTCCATCCCATTCCATTCCATTCCATTCTATTGC11.8867924528301887No Hit
GCATCAGCCTGCATGGCGCGATCGGCCGGGCTGGGCCGGTCCCGGCCGAC11.8867924528301887No Hit
GCAACCTTCGCCTCCTGGGTTCAAAATGCTTGTATTTTTTTCAGAAACGA11.8867924528301887No Hit
GCCGTACAGCGAACTGATCAAGAAAGACCCGGGTCGCCTGCGCATCGCGC11.8867924528301887No Hit
GTTATGTGGAGTGAAAAATGGCGCACCCAACTTGCAGTAATCCACCGCAT11.8867924528301887No Hit
GCAGAACCAGCCCTGACACCCGCACGAAGGTGACGTAGATGTCGATGTTT11.8867924528301887No Hit
CTGATGTGCTTTTCCAGCCGCACATAATCGGCTGGCCGCGCCCTCTCCAC11.8867924528301887No Hit
CGTTTTACATTTGGACACAGCAAGGTCAAAACTATGCCATTGAGATTGCA11.8867924528301887No Hit
CTCACTGTGTTACCCAGGCTGGAGTGCAGTGACACCATCATAGCCCACTG11.8867924528301887No Hit
GGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTACCCG11.8867924528301887No Hit
CGCTTTCACCACCTCAGGATGTTTCTCGGCAAAATCTTTGCGCACCACCC11.8867924528301887No Hit
GTATGCAACAGCTGCTTTTATCTTTTCCCATCCTGGCTGCTATCATGTGA11.8867924528301887No Hit
GTGGCTCACTTCTGTAATTTCAACACTTTGGGAGGCCAAGGTGGGCACTG11.8867924528301887No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)