FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635465

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635465
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCTGCAGGCTGTAATGCAGTTTAATCAGAGTGCCATTTTTTTTTTTTT211.11111111111111No Hit
ATACAGAATGGATTTCTGTTTTTTCTCAGTTGCTAATACCACACCATTTG15.555555555555555No Hit
CTGCATGACAGCGCTGACAGTGACACTGATGGTGCTGAGCTCCCCACTGG15.555555555555555No Hit
GTGCAAAATGATCCACAAAAGTCAGAAACCTATTAAATACTATTCTTTTT15.555555555555555No Hit
CATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCG15.555555555555555No Hit
CATCTCCATCCACGTTGGCCAGGCTGGTGTCCAGATTGGCAATGCCTGCT15.555555555555555No Hit
GTGGAAGGACTCATGACCACAGTCCATGCCATCACTGCCACCCAGAAGAC15.555555555555555No Hit
GCACCTGGTGCTCCGTCTTAGAGGTGGGATGCAGATCTTCGTGAAGACCC15.555555555555555No Hit
GGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGA15.555555555555555No Hit
GTACATGGGAGCCGCCGGGGGTGCCCTGCAAGCTGTTCCGCGCGTCCTGC15.555555555555555No Hit
AGTCTGAATGCTCCACTTTTTCAATTCTCTCTCCATTCTTCAGTAAGTCA15.555555555555555No Hit
CGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGA15.555555555555555No Hit
CATCTACAAAATGCCAGTATCAGGCGGCGGCTTCGAAGCCAAAGTGATGT15.555555555555555No Hit
GCAGAAGGCAGCATGCCCGGGCTTTGGAGTCAGACCTGCATACAAATCCT15.555555555555555No Hit
AGCTGTGAGAGACACATCAGAGCCCTGGGCACTGTCACTGCTTGCAGCCT15.555555555555555No Hit
GATCTAACTGTTCCGAAGTTTTTAGTTTTGTTCTGGCATCTTTGTCCCAG15.555555555555555No Hit
GTATCCCAATTCTCAGAGGTCCCGCCGTACGCTGAGGACCACCTGAAACG15.555555555555555No Hit

[OK]Adapter Content

Adapter graph