FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTTATTGGCAGCATCTTCTTTGCCTGTGATAAGTTGCTCAGGGTGGAAG15.555555555555555No Hit
GGCCATGAGGTCCACCACCCTGTTGCTGTAGCCAAATTCGTTGTCATACC15.555555555555555No Hit
GGCATCACCCCGCTAAATCCCCTAGAAGTCCCACTCCTAAACACATCCGT15.555555555555555No Hit
TGAAAGGAAAGTGCAATGAAATTTGTTGAAACCTTAAAAGGGGAAACTTA15.555555555555555No Hit
GACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGCCTTAGCTGTGCTCGC15.555555555555555No Hit
ACGCAGAGTACATGGGGGCTGTGCTTTGGCTCTTCGGGTAAAGATGGCGG15.555555555555555No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC15.555555555555555No Hit
TTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGAC15.555555555555555No Hit
CGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGA15.555555555555555No Hit
ACTACAACCAGAGCGAGGCCGGTTCTCACACCATCCAGAGGATGTATGGC15.555555555555555No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA15.555555555555555No Hit
GTGTAAACCTCTCCACTCCGAGGAACTGTTTCCAGCATCACCAGGGTCTG15.555555555555555No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG15.555555555555555No Hit
ATATACCCCATGGCTGTGGTGGCAACTGCAGAGAGGGGCCTGATTGTCTA15.555555555555555No Hit
TGTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACAC15.555555555555555No Hit
CCTAGGAGAAACAGACAAGCAAAACAAAGTGAAAACCGAATGGATTAACT15.555555555555555No Hit
CTGTCTGTCCATCTGGAAGATGGGCTAGATGTGCGCAGAACAGGGGCTCA15.555555555555555No Hit
GCCACAGTCAGTGCACACGTAACACTCAGGGTGGCGGTGACGGTCCCGCA15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)