FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003636148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003636148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCTGACGATTCTATCTTATCTTATGCTTAGAGATAAAATGGACCCTTC57.246376811594203No Hit
GTGACACCCACAAGGACAAGACGCTCCAGCGGGAATTCACCGAACGCGAA45.797101449275362No Hit
GCGCCATGGTGATGGCCTGCTGGCCGCTGTGGGCCACTTCCAGGTGCCAT34.3478260869565215No Hit
CAGTTGGGCAGCAGCGCGTTCTCGGGATCTCGGAACATGCGGCCGACGTT22.898550724637681No Hit
AGCCAGCCTCCCCAAAGGCTGGTTTTTTTCTAATAAGTATCATTTCGGGT22.898550724637681No Hit
GAGCTGCTCGCTTCGTTCGGGCGGTCTGTCCCGCAAAGGTCACAAATCGG22.898550724637681No Hit
GTTCAACACGGCTTGGCGAGCTGCTTCAGCAGCAGCATGGTCTGTGAAGA22.898550724637681No Hit
GTGCCAACCCGGTCGTGACGTTCTTCCGCATCACCCTGCCCGTGATCGCA22.898550724637681No Hit
GAGCGAGACCGCCGTGGCGGGCATGACCGACCTGTACGTGCTGCTGCAGC22.898550724637681No Hit
TGCCTGCACCGTTCAGTGGCCGCAGCTGTCAGGGAAAGAGCTGGCGCAGA22.898550724637681No Hit
GGTCTTCGCTCATACGTCGGCTCCAGTTTCCTCACCCCCGGCCGGCGGTG22.898550724637681No Hit
TCCTGAGCCCTCGCCGAACTCTGACGACCTAGATCACCCCACCCAGGTCT11.4492753623188406No Hit
CCGCTATACTTATCCAGGGCGGCACAACGCTGTAAGCGGCTTGCGCCTGA11.4492753623188406No Hit
GGCCCGGGCCCCGAGGCGTCGCTGCTCAAGATCAAGGGCACGCAGATCCA11.4492753623188406No Hit
CTAACAGCCTGGGCTGGTCGGAGGTGTGCAAAGACGGAACGAAGAAGAGA11.4492753623188406No Hit
GCGCAGCATCGGATTCGCGCGCAAGCGCAGCATCGGATTCGCGCGCGAGC11.4492753623188406No Hit
GATTTATGAGGCCCTTGGTGGCGAGGGGGTGTGGGCGGCCCAGCCTGAGC11.4492753623188406No Hit
AGCGCAAACAGCCAGCGCTGGCGCGTCGGTTCCAGCGTAATGTTGTAGTC11.4492753623188406No Hit
GGGCGCCGCAGGGTGGTGCTGTGGTCGCGCGTTGCACTGCTGGCGATGAT11.4492753623188406No Hit
GCCCTGGCGGCCATCGCCGGGGCGCGGCCCGACGTGATCTCCATGGATAT11.4492753623188406No Hit
GCTCAGGATTCACCAGTCCTACCACCTGGGCATACAGAGGTGGCAAGTGT11.4492753623188406No Hit
GCGCCTTTACGCGCGCCACCAGACGCCATGTTTTGATTTCTCCGGGGTGA11.4492753623188406No Hit
GAGCAGCATGGCGGGGTGCGGCTTAGAGAACGTCTCATCGGCGCAACGCG11.4492753623188406No Hit
GGTGGAGGAAGCGGCTAACACTTCGTGGCGACCTGCCGGTGTTTTTAGCC11.4492753623188406No Hit
CATCGATGACACGCTGTGGGCCGATGCCGTCGCGACCGCCCGGCAGCCCG11.4492753623188406No Hit
GTTCTGGGCCGAAGGCCGCGGCTGGCTGCGCAGCGACCCCACGGCCGCGG11.4492753623188406No Hit
GTCTTAACCCGACCGTGGAAGCAGGGCAGCAGGAGCGCAATCGTTTGCTT11.4492753623188406No Hit
TCAGCGATCCGGTGCAAGGCAAGGTCTCGAAAAAGTGGTCGATCCAGTTC11.4492753623188406No Hit
ACAGGTCGCTGACCGACACCTTTGGTGCGAACCCGGCGCCGGTCCGCATC11.4492753623188406No Hit
CGGTATGTCGTCGGCCGTTGCGAGCGCGCGAGCGCGGTGCGTCGGCAGCG11.4492753623188406No Hit
CAACCTGGCCGCCCGATTCCGCATAGAACGGGGTGTGGTCCAGCACCACC11.4492753623188406No Hit
GGCCAATCGACGGTGCCGCTGGTGAACGCCTGGTAGTTCTGGCCCAGCGT11.4492753623188406No Hit
GACTTGCCCGGAATGTAAGCGCCAGAAATGCCTGGTGCCGTCCGACCGTA11.4492753623188406No Hit
CCTGAGCACCTGTGCCAACCCTCGCATCGGATAACCGGCGCGCTTGGCGG11.4492753623188406No Hit
CCGCAGGATCGTGCTCTCGTCGGGCAGCCGCTGGTCCCAGCCTTCGAGCC11.4492753623188406No Hit
GATGAGCAAACCGACAATCATTTTCTCCTCGGTTGCAATTGCCACGTTGG11.4492753623188406No Hit
GTGAAGCGGTCCATCAGCGGCGCCCACAGGAACTTGAAGATGTACGCCTG11.4492753623188406No Hit
GCTCAACCGCGTCGTGTCCCGCTCGATCGACGCGCAGAGCGTCCTCGGCG11.4492753623188406No Hit
CTTCGGCGGCATTGCTGCCACCATGTGTTTTGCTCCGGCATTCCACCACG11.4492753623188406No Hit
TCCGTGCCCGTGGCGCTAGGACGATCGTGCTTGCCGAGCGAGGGGACGAC11.4492753623188406No Hit
GGATCAAGTGGCTGACCTGTTGCTGCCCCTGCTCCAGGAGGTGATGAGTT11.4492753623188406No Hit
CCCACACGGCGATGGTGGCGTGCGGCTCCATCGGGTTGTGCGCTTCCATG11.4492753623188406No Hit
CGGCCTGGCCGCCGAGCTCGGCGTCCAGCTCGACCGACTGGGTGACGCCG11.4492753623188406No Hit
TTCCGCAGATCAACCGGCTGATGACGGCGTACGTGGCACGCGTGCTCGGC11.4492753623188406No Hit
GTTCCCGGCTTTGATCTTCGGCCTGCTCGGGTCCTCCCGCCTGCTCGTCG11.4492753623188406No Hit
GTTCATGCCGCTGATCACCGCGCCGCCGCCAAACACCTTGGCTTCCAGGG11.4492753623188406No Hit
CTTCACAGCAGCCCTTCCCATCACAGGCCCAGAGGCCTAGGAGGAAAAGA11.4492753623188406No Hit
GACCTGCTCTGGCCCACGCTGGCGGCCCGGGTGCCGGCGCTGGAAGCGCT11.4492753623188406No Hit
TCGGTGATGGTCGCAGGGCGCGAGGAAGAGGATGGGAAATCAGTCACGTT11.4492753623188406No Hit
TTTCACTACTGAATCATACCTACGGCCAGTTTCGGACTGCGTCTGTGGCG11.4492753623188406No Hit
CGGATGGCGGGGGTCGGGTTCATGGGCGTAGCCTCCTGGTCTAAAGGTTC11.4492753623188406No Hit
CCGCCCGCGTGGTGGGCGGCACCGACAGCTCGCTGAAGACGCAGGCGATG11.4492753623188406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)