FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003636288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003636288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCGGCTCGGAGCCCTGGAAGCAGCAGCTCACCGAGGACGGGGACTCGT53.4722222222222223No Hit
GGCTTGGCTAGCAAATGCAGTCTTGTTATGCAGATGAAACCTCACAGGTA32.083333333333333No Hit
ATAGAAGCCCGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGA21.3888888888888888No Hit
ATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCC21.3888888888888888No Hit
GCAGTGAACCAGTTGTCCAAGACCTGGCCCAGGTTGTTGAAGAGGTCATA21.3888888888888888No Hit
GGACTAACAAGCTGCTCTCAAGGTGTGATCTGCCGACCCCTGGGTGGTTC21.3888888888888888No Hit
GCATCATTATGAAGATGCATTTGGGAGTTAAGCCCCTATGTCTCCCTAAC21.3888888888888888No Hit
ATGGTATAGTGACCCCGTCCACGTCCTCCAAGCTCACGACCTTGGAGCCC21.3888888888888888No Hit
GCAAGAAAGTGAAGCTGGACTATTACTTCACACCTTAACTCAACCCAAAC21.3888888888888888No Hit
AGGGTAGATCGAGAGCATCCTATTTTGAGAGCAATGGGTAGATTTTTTGT21.3888888888888888No Hit
TCCGTCCCGAGGCCTATGACGCGCTCGTCATCCCGGGCGGCCGCGCACCC21.3888888888888888No Hit
GGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCC21.3888888888888888No Hit
CCATGGTCAGGTACATGCGCAGCTGGTTCCGGGCCCCACGCACCGGGACC21.3888888888888888No Hit
GGTATTAGCTGTTATTTTGGTGGCTGAATTGGTTGTTGAGTTGGTTGTCG21.3888888888888888No Hit
GAATCCAGTAAAGACCCACTCTTTGATGGTGGAGTAGGGGTAGGGACCAC21.3888888888888888No Hit
GTAATAAGTAGCCTGTCAACCAAAAAACAAGCCCAGGACCAGAGAGAATC21.3888888888888888No Hit
GGGAAACAAAGTATGCCTCCGAAAACCACCTCAGCCGCTTCGTGTGGTTC21.3888888888888888No Hit
ATCCTTTTGTATTCATCAAACACATGCAACAGGTGATTTCGGTTCCGGGA21.3888888888888888No Hit
CTTCAGTAAGTCAACTTCAATGTCGGATGGATGAAACCCAGACACATAGC21.3888888888888888No Hit
AGGAAATACCCCCCTACACCTTGCCTGTGAGCAGGGCTGCCTGGCCAGCG21.3888888888888888No Hit
ATAGGAAAGGGGTCTGTGATGGGTAGATAGTGTGGTTGGAGACACGGATT10.6944444444444444No Hit
ATGATGAAGTTGCATTTAGAAAATTCAAGCTGATTACTGAAGATGTTCAG10.6944444444444444No Hit
CTTCCTTAACAGAGGAAATCTCTAAAAGAGGAGCAGGAATGCCTGGGCAG10.6944444444444444No Hit
GCTCTGGCCCCACTATCTATCAGCTCCTCTCTGCTTGTGAATCCTTTAAG10.6944444444444444No Hit
AAGTTGTACCACTCAGAAGCCTTCACTGTCAACTTCGGGGACACCGAAGA10.6944444444444444No Hit
CTGCAAGCTCTGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCC10.6944444444444444No Hit
GGTTAGGGTCAGGAGACGGCCAGAGCCTGTTTGTTAGGGCTGTTAGAGGG10.6944444444444444No Hit
TCATGGTGCTGGGCGCCAGGGCGGTGATCTCCTTCTGCATCCTGTCGGTA10.6944444444444444No Hit
TATCAACGCAGAGTACATGGGGCTTTTTCGCAACGGGTTTGCCGCCAGAA10.6944444444444444No Hit
CATGCTGAGGATATTTGTGTGTGTGAGAGAGACAGAAAGAGAGTGAATGT10.6944444444444444No Hit
GGTCTTGCTACCAACTGCCCCTGAAGTGGTGCACCAGAAACCACGGCCAC10.6944444444444444No Hit
CTTTCGCTCTGGTCCGTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGG10.6944444444444444No Hit
CCCCTGGTCCGCACCAGTTCTAAGTCGGCTGCTAGGCGCCGGCCGAGGCG10.6944444444444444No Hit
CAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGC10.6944444444444444No Hit
CCTCTAAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAACTAGTT10.6944444444444444No Hit
TTGCTGGCCTGGCTGTCCTAGCAGTTGTGGTCATCGGAGCTGTGGTCGCT10.6944444444444444No Hit
GCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTGTGGAGCAGGCAGCTC10.6944444444444444No Hit
ATCATGATGTCGCTGGCCATCGCCGAGCACATGGCCGCCAACGGCGTGAA10.6944444444444444No Hit
AACTATAAGCCTATAATTATATGGTTCATAAAATAGAAAAGATAATAAGA10.6944444444444444No Hit
CCTCTAAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCTGTCTCTTATAC10.6944444444444444No Hit
ATCCTGAACCATCCAGGCCAAATAAGCGCCGGCTATGCCCCTGTATTGGA10.6944444444444444No Hit
CGCCGCAGCTTAGCCTGGGAGGGGTTGTTGGTGGAACAGTCCACAGACAC10.6944444444444444No Hit
GGCCACCACCGCCTACTTCCTGTACCAGCAGCAGGGCCGGCTGGACAAAC10.6944444444444444No Hit
CCTGCTTAGTTTATTGTCTTTGGTATTGGAAAATGCTGTACACAACATAT10.6944444444444444No Hit
GGTGAAGCCTTGCGACGTATTGCTGAGGGTGCCTCTATGATTCGTACCAA10.6944444444444444No Hit
GAAAATTACTATGTTTCAAAAAATAGTGAGCAGAGTGGCACCCTTGAGAA10.6944444444444444No Hit
CGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACT10.6944444444444444No Hit
GCCGATGTACAGCGCTGCGCCCAGCTCGTACTTCTGCGACACGGGCACAG10.6944444444444444No Hit
CTCTAAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAG10.6944444444444444No Hit
GGGTTTTACTAGGCACTTCTCTGTAATTGAGAAACTTACTGGAACTTCTC10.6944444444444444No Hit
GCAGCGACCACAGCTCCGATGACCACAACTGCTAGGACAGCCAGGCCAGC10.6944444444444444No Hit
ATATCAGCCAGCTACATATATTTGGAAGAAAGCTCCTATTTCTGTTAGTG10.6944444444444444No Hit
TCCCAGATGATCCCAGATGGGGCATGGGTGCTGAAGGCTGGGTGTGTCCT10.6944444444444444No Hit
GGTCTAACAGCCAAAATGTGCAGAGGAAATGAGCTCCTGCTGTCTTCCAT10.6944444444444444No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT10.6944444444444444No Hit
ACCTACCCGAGCGGCTGCCAGCTGCGCGCCGCCAGCCAGAGGGCCGAGAG10.6944444444444444No Hit
GCTCCTTCCCCATCGTTGCCCCCATTTCTGAGGTGCACTGGGAGGCTCCC10.6944444444444444No Hit
GGAGAGAAGTTTGAAGAAACCACAGCTGATGGCAGAAAAACTCAGACTGT10.6944444444444444No Hit
ACATTATAAAAATCTGATGGCAAAAGCAAAACAAAATGGAAAGTAGGGGA10.6944444444444444No Hit
GGTCAGGCCATCCGCCGACACATTGACGGATTGGGCAAGAAGCGGCTTCA10.6944444444444444No Hit
GCCTTCTTCTTAGGTTTGCAGATGATACATATACAGAAAGCTACCTGTCT10.6944444444444444No Hit
GAGATAGAAAGACCAGTCCTTGCTGAAAGACAAGTCTGAATGCTCCACTT10.6944444444444444No Hit
GATAAGAGCTTAACAGAAGCTGAGCGTAAAGAAAAAGAAAACGCTCAGCT10.6944444444444444No Hit
CCATGTACCTCTCTTTTTCAAGGTACTGTACACAGGAGCTTGAGAAGAGA10.6944444444444444No Hit
AAACTGCTCCATCAAAAGAAAGGTTAAACTCCTTGAGTTGAACACACACA10.6944444444444444No Hit
ACCAGGAACTTCTCAAAGTTCCAGGCAACATCGTTGCGACACACCGGAGA10.6944444444444444No Hit
GGAAACCCAGTAACTTGCTAGGAATCACAAGGGTAGTTACTGGCAAGGTC10.6944444444444444No Hit
AGAACAGCGTGAATGCCGGATAGGGCGCAGGCAGCGCTGGGTGCACGAGC10.6944444444444444No Hit
ATCCTGGACCATCCAGGCCAAATAAGCGCCGGCTATGCCCCTGTATTGGA10.6944444444444444No Hit
CCAGTCTGCGCCGCTAGGCGTAGGCGGGGTGGCCCTTGCGTCTCCCGCTT10.6944444444444444No Hit
GGATTACATTGGGCCCATTGAATAATCCAAAATAATCTCCTTAATCTCAT10.6944444444444444No Hit
GGTCATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCC10.6944444444444444No Hit
ATATAGGACTGTAGTTTTTTTTAGTTCGAGAGCCTTTCGAAGCTTAATTT10.6944444444444444No Hit
GCTTATCACAGTGAAGCAGACACGGTCGGCCATGTTAGTTGTGTTAACCG10.6944444444444444No Hit
AGTCGGGGGCTCCCACGAAAGCCGCCGTGGCGCAATGAAGGTGAAGGCCG10.6944444444444444No Hit
CGGCCGTCCCTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGA10.6944444444444444No Hit
GTGTAACATACTCCCCACAGTCTACTTTTACAAACGCCTGTAAAGACTGG10.6944444444444444No Hit
TTCATGTAGAGACGCATCTGGGTGCGCGTGTAGTCACTATTAGTTTCATG10.6944444444444444No Hit
TCTCATTAGGGTTTAAGAATATTTCAGGGATCCTTAATGTTTTGATTTTT10.6944444444444444No Hit
GCCTCGTGGTGTATGACTACCAGCAGCTGCTGATCGCCTACAAGCCAGCC10.6944444444444444No Hit
CACATGGAGAGGATGTCTGGGCCCAGCCCAAGGGTGGCTTTGATAATGAG10.6944444444444444No Hit
AAGTTGCTGCAGTTAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCG10.6944444444444444No Hit
GTTGAGACAGAGATGGAGACACCTCAGCCCCACCTCTCTGGAACAGGAAA10.6944444444444444No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTT10.6944444444444444No Hit
CACCGCGCCTGGCCGCCTGGCTAATTTTTGTATTTTTAGTAGTGATGGGG10.6944444444444444No Hit
CAAATGGCTTTGTTGTACTCAGTACCTTCACTATCACTGGGCGTTTTTGG10.6944444444444444No Hit
CCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAAC10.6944444444444444No Hit
GTACACGGGGCTGTGCAACTTCGTGGAGAGGTGGGACCAGCTCACCCTCT10.6944444444444444No Hit
GCTGCTGATTGTGTTCTAGGGGACGGAGTAGGGGAAGACGTTTGCTCTCC10.6944444444444444No Hit
TATGAACATAGTAATGAGAGATGTCAACAATAAATGTTCTGGAGGAACAG10.6944444444444444No Hit
GTCTCAAATAATTACGATTTTCTTGGGAATTTGCTCTCTTCCCTTTGTCT10.6944444444444444No Hit
GCAGAAGGTTGGCCACTCGGGTGATGGCTACACGGCCCTCCATGCAGTCC10.6944444444444444No Hit
TCAACGCAGAGTACATGGGACCCCAAGTGCCTGTGCCCAGAGGGCTTCAG10.6944444444444444No Hit
CTCCGGGCCGGGTGAGGTTTCCCGTGTTGCGTCAAATTAAGCCGCAGGCT10.6944444444444444No Hit
GGCTCCAGGTGAAGCAGCGTCTCCTTCCCCTTCTCCAGGTATTTGTGGAG10.6944444444444444No Hit
CCTCCGCACCTCTCTCCACCACTCAATAAAAACTTGCACTCATCCCAAGA10.6944444444444444No Hit
TGTGTGTAAACACCCACATGCACCCACACCCACATGCCTGGCAGTACACA10.6944444444444444No Hit
CAACTACATCGTGCTGGACGATGCCTCCGACACCACCGCGGCCGTCAACA10.6944444444444444No Hit
GTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAG10.6944444444444444No Hit
TTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGACGAGTCCGGCCCCTC10.6944444444444444No Hit
CACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATCCTGTC10.6944444444444444No Hit
CTGACACTCCTGTGGTGACAGGTTTTCCATTTCGAAGCCACGTGACATTG10.6944444444444444No Hit
CTCCAGATCTGTCTGTGAATCATTAGATTTTTTTTTTTTTGCCCTGTGAG10.6944444444444444No Hit
AGGCGAGCCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGAT10.6944444444444444No Hit
GCCACGGGCAATCCGTAGGCTTTCAGCAGCCGCAAGCACAGCCATTCGTT10.6944444444444444No Hit
GATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGC10.6944444444444444No Hit
ATGATGAAGTTGCATTTAGAAAAATCAAGCTGATTACTGAAGATGTTCAG10.6944444444444444No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG10.6944444444444444No Hit
GTTAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCGA10.6944444444444444No Hit
CCATAGATACATACAGCTTTTAGCACAGCGAGATCAACGGGCTCAGACAA10.6944444444444444No Hit
GCCCCAATTCCTCCGCCTTGCCGGGAAAGGTTGATCCCTTGTCCCGTCAG10.6944444444444444No Hit
ACGAGCTAGTGAAAGGGATCTTGCCTCGGAGCTGGTCCCACTACACGGTG10.6944444444444444No Hit
GTATAATTTTCTTTACTTTTTTGGTGGAATTTTTAAAAAGCTCAGCATGG10.6944444444444444No Hit
ATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAA10.6944444444444444No Hit
TGCCTGGACCACCTCATCCTTGGCCTGTGCCCAGGGCCCTGAGTTCTGGT10.6944444444444444No Hit
CTGCAGTCTCTGCCTCCCGCGTTCAAGCAATTCTCTGCCTCAGCCTCCCG10.6944444444444444No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATTTTTTTTTA10.6944444444444444No Hit
CCACTGGAGGGTGTGAGACCCGGCCTCGCTCTGGTTGTAGTAGCCGCGCA10.6944444444444444No Hit
GATGCGCACAGCGCATAATCGGTGCATGGACGAGCAGACGCTGCGCATCT10.6944444444444444No Hit
CTGTGAAATAGTAAGAAATACTATATTGATCCCCGACCCCAGTCTCTGTC10.6944444444444444No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)