FastQCFastQC Report
Wed 27 Apr 2022
EGAF00003636386

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003636386
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCCAATGTTCGCGCACATGTTCCTGTTGCTCGATCGTCAATGTGTGTA220.0No Hit
GTACGGCCATCCGGACGACTTCTTCGCCAAGGCCGAGTCCGAGATGAAGG220.0No Hit
GGTCCCGGTCAACGGACCGCTATAGGCGCCATTGTCGGCGGCAAAGGCCA110.0No Hit
GGGTACTCGACGACATGCGCCGCATCCGCGACATCGCCCACGAGCGCGGC110.0No Hit
GTACGGCCATCCGGACGACTTCTTCGCCAAGGCCGAGGCCGAGATGAAGG110.0No Hit
GTACGGCCCTCCGGACGACTTCTTCGCCAAGGCCGAGTCCGAGATGAAGG110.0No Hit
ATCCGGAGGCGGCAAGGCGGACGGCCTGGCGCCTGCTGCGGATACAGGGC110.0No Hit
TTGGTGGGGCGCGCCGTCTCGCCTCCAAAGCCTGAACGTCCGATTAATCG110.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)