FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003636583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003636583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCAGAGTACATGGGACCCAGAGGTGAATGCAAAGTAAAAAGAAAAAAA210.0No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCA15.0No Hit
ACGCAGAGTACATGGGGAAACGACAGGGGAAAGGAGGTCTCACTGAGCAC15.0No Hit
TCATAATCCATGCCGATGTCATTGGCATTGCCCTTGATCCAACCCTTGGG15.0No Hit
GTCCCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCAGTCTTGGTTCACTG15.0No Hit
ATTCTATATTCTGTATCCACGAGATCAAGTTTGTTAGCTCACACATGTGA15.0No Hit
CTCTGGGGTCTGGGGGAATACGGGCAACAGCAGTCAGGAGGGGTACCCCC15.0No Hit
CTATCACTCTGTAGTATATTTTAAAATCTGATAGTATGATGTCTCCAGCT15.0No Hit
ATCAGGAGGTGACCCCATCGGTAATGGAGAAGTGCTGGGAGGTAAATATT15.0No Hit
AATTAATGGTTAGTACCAAGAAACATGAAGCACTTTTCCAGCTTGTAGAA15.0No Hit
CCAGTGGGCCGTATTCATCGACACCTAAAATCTAGGACGACCAGTCATGG15.0No Hit
GGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCAC15.0No Hit
GGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCTACCCAC15.0No Hit
GGCATGCCCCCTCCCATTCCAGGCATTCCTCCGGGAAAATTACCAGGCAT15.0No Hit
GTGTACACCGCCCTTAGACGTCTTGGTATACGGACAACTGATGGACCCAC15.0No Hit
GCTTAGAGAAATGAGGGCAAGAAGCAAGTTAGAGGACCTTCTCACCACTT15.0No Hit
GCCCTGGCCCTGACCTGGCAGTGGGATGGGGAGGACCAAACTCAGGACAC15.0No Hit
GTAGGAAAACTGACTGTAAGGCTGGAGACCAAAAGGAGATCTCTTAAAGG15.0No Hit
GCCCAGGATGCCCTTGAGGGGGCCCTCCGACGCCTGCTTCACCACCTTCT15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)