Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00003636668 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1479159 |
Total Bases | 147.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 6087 | 0.4115176258941737 | No Hit |
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA | 5107 | 0.3452637613671012 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 2450 | 0.1656346613176812 | Clontech Universal Primer Mix Long (96% over 26bp) |
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG | 2361 | 0.15961772872287563 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG | 1914 | 0.12939785378042523 | Clontech Universal Primer Mix Long (96% over 26bp) |
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG | 1575 | 0.10647942513279507 | Clontech Universal Primer Mix Long (96% over 26bp) |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1565 | 0.10580336529068207 | No Hit |