FastQCFastQC Report
Tue 10 May 2022
EGAF00003638093

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003638093
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences930628
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG11390.12239047181043339No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTGGACCCAGTATCTCGTATG11020.11841466192721473No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9460.10165178782499561No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)