FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003640762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003640762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTAGATTATCCATTCAGTTGATCCTAATTAGCAAGGATAACAAGAAT27.6923076923076925No Hit
CTCCGGCCCCGGCCGGGGCCGGAGAGGGGCTGACCGGGTTGGTTTTGATC27.6923076923076925No Hit
GATTAAACTGCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTA27.6923076923076925No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA27.6923076923076925No Hit
CTTCAGAAGGCTGGGCGGACCACTTGAGCCCAGGAGTTGGAGCCCAGCCT13.8461538461538463No Hit
ATGATGATGCCTGTGATGAACAGCACAGCTGCGACCAACAGCCCCCGTTT13.8461538461538463No Hit
GCCCAAGATAGTTAAGTGGGATCGAGACATGTAAGCAGCATCATGGAGGT13.8461538461538463No Hit
GGGTTATAGCTGTAGATGTCACATTCAGCCAGGCAGATCTCCTCGTCCAC13.8461538461538463No Hit
CCGCTCATCACATTCTTAAACAGAGAATTTTATTGTTGAAGAGAAACCAG13.8461538461538463No Hit
TACCAGCACCATGCCCTACCAATATCCAGCACTGACCCCGGAGCAGAAGA13.8461538461538463No Hit
GATAAAGACACTTTTTCAAAAATGGCAATGGTATCAGACTTCCTCAAGCA13.8461538461538463No Hit
GGGTAGGCACACGCTGTGCCTTTGCTTTTAGCGCGCGTGAAGCCCCGGAC13.8461538461538463No Hit
GCTGAAGGACGAATCTCAGGGGAGCAGAAATTAGCTGAAGGCCACAGAGG13.8461538461538463No Hit
AGAAAGTTCCATAAACAAGTGTACTGTTTAACCAATTCCCTTCTATTACC13.8461538461538463No Hit
TGGCGGAGCCGGAGCAAGCAGGGGTTCGGCGGCATTCGCTGTACCCATTC13.8461538461538463No Hit
CTTCTAGCATTGTTGGGCTTGGCTTTGGTTATATCACTGATCTTCAATAT13.8461538461538463No Hit
AGGACTGACTGCAGAAAATAATGGAAAGGATGTTTAACTCTTTTATCTCC13.8461538461538463No Hit
GACAATTAACAGCCCAATATCTACAATCAACCAACAAGTCATTATTACCC13.8461538461538463No Hit
GGCAAGTACTGCCATACCTGGCTAATTTATTTTTTGTGGAGATGGGATCT13.8461538461538463No Hit
CCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTAACCACTCATTC13.8461538461538463No Hit
GGCAACATAGAGACCCTGTGGCGCATCAGTTTCTGGGATTTTGTGGACGT13.8461538461538463No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCAA13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)