FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003640836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003640836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTCAACAGGAATGGCCAGTAAAAGTTGTTTTATTTTTCCTGTTAAGG31.7045454545454544No Hit
GTGGAACCCGTCTCTACTAAAAATACAAAAAACTTAGCTGGGTGTGGTGG21.1363636363636365No Hit
CTTCAAGAACATCCTGGTAGACGAGATGGACATGATGCACGCCCGTGCAG21.1363636363636365No Hit
ATTAAACGCTATTGTCATTAAAGAAACCAAAGATTGGGATGCTTGGAAGG21.1363636363636365No Hit
ATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCCTTGT21.1363636363636365No Hit
GTTTTCTAGATATACAATCATGTCGTCTGCAAGCAGAGACAATTTGACTT21.1363636363636365No Hit
TAAATATGCAGACACTGGAGAATTCACACAACTTTAGGTGAGAGTTGAAG21.1363636363636365No Hit
CCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGA21.1363636363636365No Hit
GTCTTAGCATCCAAGTTTTTTGTTTTGTTTTGTTTCTTTTGAGATGGAGT21.1363636363636365No Hit
CACACACACACACACACACACACACACACACACACACACACCTGTCTCTT21.1363636363636365No Hit
GCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCT21.1363636363636365No Hit
CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGG21.1363636363636365No Hit
CCATCAAATTTTATCGGCATATATAGTCTTCACTCTGAGACAGAAGGTTA21.1363636363636365No Hit
TTGCGGGGGAGAAAAGATCTGCAACACGTAATTCCTAAATCCTGGTAATA21.1363636363636365No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG21.1363636363636365Clontech Universal Primer Mix Long (96% over 26bp)
CTCTGAAACATTAAGTGCCTCATATTTTGGCTGTAGATGCTACCTGGTAT21.1363636363636365No Hit
GCCTTCGCAGTAGCTGGGACTTCAGGCATGCACCACCGTGCCTGGCCAGG21.1363636363636365No Hit
CTAAACATCTGTGTTAGCAAAGATCTCACAGTAATGACCTCAGCTGCTAC21.1363636363636365No Hit
GTCCCAGGGACTGGGATCAAAAGACTTCTATTCCTAGCCCTAAATTAGAG21.1363636363636365No Hit
GCTATGCACCCACGACACGCTTCGCGGACAACGGCCGCGAGCGCATGCAG21.1363636363636365No Hit
GTAATGCACACTCCATTGCATTCAGCCCGCTCTCCCAGTCATCACAGTCT21.1363636363636365No Hit
AGATCCTCCTGCTTCAGACTCCTGGGTAGCTAAAACTGTAGGTACATGCC21.1363636363636365No Hit
GCCCCAGCCCGACCGACCCAGCCCTTAGAGCCAATCCTTATCCCGAAGTT21.1363636363636365No Hit
AAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGAC10.5681818181818182No Hit
CCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCT10.5681818181818182No Hit
GGGAGCCAAGATTGCACCACTGCACTCCAGTCTGGGCGACAGTGCAAAAC10.5681818181818182No Hit
GAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGAC10.5681818181818182No Hit
CTCAGGCGGTGCTTGTGGACGATGGAGTCGGCCGGATCGACCTCGAGCTC10.5681818181818182No Hit
CCTTACGCACTCGGCATTATGTACAGATATGAAAAAACCCAACGGCAGGT10.5681818181818182No Hit
GATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTAT10.5681818181818182No Hit
GTATGGATGTTCCACAATGCGTTCATCCATGCTGTTGATGGACATTTGGG10.5681818181818182No Hit
AAAATACTTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTATT10.5681818181818182No Hit
GATTAGAGGGCCCCTGAAACATCCAGAAAAGAAGTAAACAGGATTTTTTG10.5681818181818182No Hit
GTCCTTGTGCGTATGTGCAGTTTTCAGGGACACAGCGCTCATCAGATCCC10.5681818181818182No Hit
AGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCG10.5681818181818182No Hit
GCATTATAAAGTAAGATTTGTATTAGCTTGTAGCTGGTTACTGATGTTCA10.5681818181818182No Hit
TTCATGAACATCAGCGGCAATCGAGCGCCGAAAGTCTTGCGAGCCGAGAG10.5681818181818182No Hit
AGAGTGGACATTGTGGGATCGCTTTGAGGTACAAGGGCTGCAGCCTAATG10.5681818181818182No Hit
GGCCACCTACGGTGAAAAGAAAGATGAATCCTAGGGCTCAGAGCACTGCA10.5681818181818182No Hit
TCCCCCGAAGGCGCGGGCAACTCACACTGTGGGATCCCTGCCCCAGCGCG10.5681818181818182No Hit
GGACACACTTAGAGAAATGCAAAATGCACTGGAAAGTCTCAGCAATAAAA10.5681818181818182No Hit
GGAGACATTGAGAGATTAAGTACCTTACTCAGGGTCATCAAACCAGGCAA10.5681818181818182No Hit
CATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGC10.5681818181818182No Hit
GTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACAT10.5681818181818182No Hit
GTTTAAATCTGAAAGTAGTCTGTTGCTAAAAGGGTAATATTTCCCACTTT10.5681818181818182No Hit
GACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTG10.5681818181818182No Hit
CATCATAAAGCTAGAAATATCTCAAATCAATACCCTAACATCACAACTAA10.5681818181818182No Hit
GTTTCTGAGAATGCTTCTGTCTAGTTTTTATTTGAAGATATTTCCTTTCT10.5681818181818182No Hit
ATCCTGCTGATGGAGCAGTTTTGAAACTCTCTTTCTTTGGATTCTGCAAG10.5681818181818182No Hit
GTGCGATTTTATACCCCATTTTACCAAGTAGGATAGGAGTATTGTGAAAA10.5681818181818182No Hit
CGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCT10.5681818181818182No Hit
CTTCAACTCATTTTATGAGGTTGCTATTGCCAAATAACCAAACCAGTCAA10.5681818181818182No Hit
GATTACAGGTGCCTGCCACCACACCTGGCTAAATTTTTTATTTTTTTTTT10.5681818181818182No Hit
GAGGTACTGCCCGTGACGATGCTGGCCGAGGACGATCGCGTCGAGACACC10.5681818181818182No Hit
GTACATGGGAAGCAGTGGTATCAACGAAAAAAAAAAAAAAAAAAAAAAAA10.5681818181818182No Hit
GTTCCGAAAACCAACAAAATAGAACCGCGGTCCTATTCCATTATTCCTAG10.5681818181818182No Hit
CAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTG10.5681818181818182No Hit
CTGCAACCTCCACCACCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC10.5681818181818182No Hit
GCCTGGAGGAGCTCAGGGTGGCCGGCATTCACAAGAAGGTGGCCCGGACC10.5681818181818182No Hit
CTGTATCAGTTTGATGCCTGGAGGGGCTGGAGATTGGGTAGCTAAAGTTA10.5681818181818182No Hit
TCCATAGGCTGCTCCTCACTTTTCATCTTTTCACTTTCTTTCTGTTCCTC10.5681818181818182No Hit
GCCATACCATGTCACACTATTAACATCAAATAAAATGTGTATGCTTTTCT10.5681818181818182No Hit
CTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGCGTT10.5681818181818182No Hit
CCTTTTTCCAGTTCTGTGAAGAATGATATTTTGATGGGGATTGCCTTGAA10.5681818181818182No Hit
GACAGGGAGTTGGTCAAAAGGTCCTTCATGGCCAGGTGAAGGCTGGGGGG10.5681818181818182No Hit
CCCAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT10.5681818181818182Clontech Universal Primer Mix Long (96% over 26bp)
GAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTG10.5681818181818182No Hit
ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA10.5681818181818182Clontech Universal Primer Mix Long (96% over 26bp)
CACATCTATGATCCTAGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTG10.5681818181818182No Hit
GTACTTTTTTTTTTTTTTTTTTGCGTTGATACCACTGCTTCCCATGTACC10.5681818181818182Clontech Universal Primer Mix Long (95% over 21bp)
GAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATC10.5681818181818182No Hit
GGAACCCTCAGGAGAAGGAATAAAATCCTTTGTGCTTGCGTTATTAAGCA10.5681818181818182No Hit
TTTTTCTTGCCATCATTGTCAGAAATTCAGGGAAGTCAATTGTGCCATTA10.5681818181818182No Hit
GGTGCGTGACGATGTTGCGGCTGGGCGCTTGCAGGCGGTGCTGACCGACT10.5681818181818182No Hit
TCCGTCAACCATGGGGCGATCCGCGCACCGTCGCACGCCGGGTGCAACGG10.5681818181818182No Hit
CCATTCAACCAGGCAGCCACTCCTCATTGCAGGTGCTGACCTGGGCTTTG10.5681818181818182No Hit
GTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT10.5681818181818182No Hit
GATGGTGCAGTGGAAAGAATACTCCAGCTGAGGATAAGCGATCAGTATTG10.5681818181818182No Hit
ATCCAGGCGGCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA10.5681818181818182No Hit
GGTTTGTTAGGTACTGTTTGCATTAATAAATTAAAGCTCCATAGGGTCTT10.5681818181818182No Hit
GCTGTTCACATGGAACCCTTCTCCACTTCGGCCTTCAAAGTTCTCGTTTG10.5681818181818182No Hit
ACCGCGCCCAGCCGAGACAATTATGTTTGGACTGCTGTATAGAAATTGGT10.5681818181818182No Hit
CCTTAAGTAAGTGACATAACCTCTCTGGACCTCAATGTCCTCATCTGCAA10.5681818181818182No Hit
ATTCTTGACTCTGATATGTTAAATTCAATTGCAAATGACATTAACCATCC10.5681818181818182No Hit
GATCATAACCTTGGGATCCTCGACTCCTGCCCATCGGTATTCATCATCCA10.5681818181818182No Hit
GAACTTTCTCAGAGTGTTTGTGTTTAGTTATGGGAAATTATTCCCGTTTC10.5681818181818182No Hit
GCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCAAA10.5681818181818182No Hit
CTATTTGCTCTTCTAAAACAAAGTTGATCACACACACACACACACACACA10.5681818181818182No Hit
TCCTGATATGAAACAATGATTTGTTGTTTACCTGAAATACAAAGTTAACT10.5681818181818182No Hit
TACACCAAATGTCTGAACCTGCGGTTCCTCTCGTACTGAGCAGGATTACC10.5681818181818182No Hit
GTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCGAGGCGAGCCACCGCC10.5681818181818182No Hit
TCACTGATGAGGACTGAGACACCTAGGGAAAGTTTATTAGCAGACAGACA10.5681818181818182No Hit
TCTCAGAACGCTGCAGTCTGCAATTTGTATGAATTCCCGCTTCCAACGAA10.5681818181818182No Hit
GTGTTTTGGGACCACCGTGGAGAATCTGTTTCAAACTAAGGCGTGAGCTT10.5681818181818182No Hit
GTGTTTGATCCTGTCATCATGATGCTAGCTGGTTATTTTGCAGACTAGTT10.5681818181818182No Hit
TTCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCC10.5681818181818182No Hit
CCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAGGGTC10.5681818181818182No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC10.5681818181818182Clontech SMART CDS Primer II A (96% over 26bp)
ACTAACAGTGGGTCTCCCAACAGAAACCCTACAAGCCAGAAGAGGGTGGG10.5681818181818182No Hit
GTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGG10.5681818181818182No Hit
GAAAGATAACACAAACCTGTAATCCAAGCACTTTGGGAAGCCTAGGCAGG10.5681818181818182No Hit
CATCCCCTGATCTTAAATCAAAACGTCAGATCAATGAACTATGAACTAAA10.5681818181818182No Hit
AGCTTCATTTGCATGATAAATCCTTGGTCTCCACAATCCCTTATCTTAAC10.5681818181818182No Hit
CATCAGTGAAGATGATGGTAACAGAGGTTAATGTGCAGGAGTTTGGAGTT10.5681818181818182No Hit
GAGTTCTTAACTTGGGTGGGATTTATTTTTAAGTAATTTCTCTTACGAAA10.5681818181818182No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTT10.5681818181818182No Hit
CTGTTCTTTCAGCTTCCTTAAGGCTGCAATGTGGCCCTTGGCCAGATCCA10.5681818181818182No Hit
CTTCTCACCTGTGTCAGTTTCTCTCACTCCATATCTGCTTTCAGATCCTT10.5681818181818182No Hit
GCCGGACGCGGGGGTAGTGCGCGGCGTGACCGGGGGGGGGCCCCCCGCCC10.5681818181818182No Hit
TTGGCGACGTTTCCATCAACGTAAGGAAACTGAAAAACTGAGAGAAGAGG10.5681818181818182No Hit
AAGCAATTCTGTGCCTTTAAGGCCAACCTAGCCCCCAAAAATCAAGCGAT10.5681818181818182No Hit
ATCCCGGAGAAGCCGGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTG10.5681818181818182No Hit
GATACAAGAGGAGAGGGCAATGCCTGCCCAGTTAAGAAGAATGGAAGAAT10.5681818181818182No Hit
ATATAGATAAATATATTTCCAGATTTACCTTTTTAAGAATTGCTTCTAAG10.5681818181818182No Hit
CGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCG10.5681818181818182No Hit
GTGTATCAACACTTCCTTCCTTCTTAATTGCTGAATGGTATTCCAGTTAT10.5681818181818182No Hit
TCCTCGTCCTCATCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTC10.5681818181818182No Hit
GTCCCAGCCCTGTGCACATGTCCCCTGCATGTCTCCCCACTTCCTCTCCT10.5681818181818182No Hit
CATTTGCTGGATTCTGCCACATTGGAATTTGTTTAAAACATGGATCTTGG10.5681818181818182No Hit
TGTCTAACCTTTTTTCAAGGTTTTTAGCTGCCTTGCGATGGGTTAGAACA10.5681818181818182No Hit
CAAGTGAACAGCTGCGGCAGCTGTTCACTTGGGCAGGACGTCAGAGGACT10.5681818181818182No Hit
CCATTCCATTCGATGATTCCATTCGAGTCCATTCGATGATTCTATTCGAT10.5681818181818182No Hit
GACATTGATTCACCACCCATCACAGCCCGGAACACTGGCATCATCTGTAC10.5681818181818182No Hit
CTCGGAGATGTGTATAAGAGACAGGTATATAACATCACACTTGATGCAGA10.5681818181818182No Hit
GATATAGACAATTGCCTAAATCATTAGTCACTGTGAAATCTTCAAGATTT10.5681818181818182No Hit
CTGTCAACATTCTATAGCTTTTGTGCATATGTACTGAAGAATTATAACAC10.5681818181818182No Hit
CCGTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCGTGATCTGCCCACC10.5681818181818182No Hit
GCCGGACGCGGGGGGAGTACCCCCAAGGAGAGGGGGGGGGCCCCCAACCC10.5681818181818182No Hit
ATGTTATTCTCCCCCTTTATAAGCATTGTGAACCTAAGGAAAAAAAAAAT10.5681818181818182No Hit
CCCTTTAGCATTTCTTGTAGGACAGGTCTGGTGTTAATGAAATACCTCAG10.5681818181818182No Hit
GAATGGAATAATCCATGGACTCGAATGCAATCATCATCGAATGGAATCGA10.5681818181818182No Hit
GCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGA10.5681818181818182No Hit
TGTTTGTTGGGAAATCTCCATTCTTGGGTATCTTTTTATGAAATCATGTT10.5681818181818182No Hit
AAAGAAGGAAATGATCCAGTCACTCCCACTAAAGAGATTGTCAAAGAAAT10.5681818181818182No Hit
GGCCAGGACAGCATCCACGCCGCCTTGAGCGCCTATGTCGCCGAAGTCAA10.5681818181818182No Hit
GTTTGGACTTCATCTTTCCAAATACCTATGATAGCATATCTATCCTATCC10.5681818181818182No Hit
TTCCCCTGGTCCGCACCAGTTCTAAGTCGGCTGGGAGGCGCCGGCCGAGG10.5681818181818182No Hit
GCCTGGATAATTATTTTGCTGTGAGAGGCTGACTTGTGCATTGTAAGATC10.5681818181818182No Hit
GTTGTAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGCGATAAGA10.5681818181818182No Hit
GTATTAATAGGCTTAATAATTGTTGGCAAGGATCCTTTTGCTTTCTTTGG10.5681818181818182No Hit
GAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCTG10.5681818181818182No Hit
ATCTGATCGTCTTCGAACCTCCGACTTTAGGTATTTATTAATTTAAAAAT10.5681818181818182No Hit
GTGCAAGAATAGTTTGAATCCAGAGTTGAAGAGTAAGGAACTCTTATTCA10.5681818181818182No Hit
GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACG10.5681818181818182No Hit
ACCCAGGAGGGGCAGTAAGCCCTTGTCACTTTCAGAAATTGTCCTCCAAT10.5681818181818182No Hit
CCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCA10.5681818181818182No Hit
CTTCTTCACATATATTTTGGCTAATTTATCTGACTATGCCCTAAAGTTAA10.5681818181818182No Hit
ATCCCACAGATGGTAGCTTCGCCCCATTGGCTCCTCAGCCAAGCACATAC10.5681818181818182No Hit
TGTGGCGTGCTAGCTGGATGTCTTTTGGCATAATTGTTACATGTGTGGCA10.5681818181818182No Hit
GTGACTTGCTCAAGGCCTCATGCCAGTCTGTGGCAGAGTGAGGCTTGGCT10.5681818181818182No Hit
GCTTGGGAGAGGCCAGTCACCAAGACAGGCATCTCAAATCGGCTGATTCT10.5681818181818182No Hit
ATGTTCCAAAAGCTAGAGGAATAAAGGCATGGAAGAGGTACAAAAAAAAC10.5681818181818182No Hit

[WARN]Adapter Content

Adapter graph