FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003640848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003640848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTGGATGAAATAGCCCAGATGATGGTGTATGTCCCCAAGGAGGAACAA210.526315789473683No Hit
AACCCATTCCAAAGAAAGGTACTGTGGAGGGCTTTGAGCCCGCAGACAAC210.526315789473683No Hit
GTACATGGGAGCGCGGGGTCAGCGGAGGTCAGCGGGGGTCAGCAGCAGCG15.263157894736842No Hit
CTGGAAGCCAGCACAGTTGTCCTCCTGCCCAGTTGTCCCGGAGCTCCAGG15.263157894736842No Hit
CCTCAGCCCTGAAGGCCAAGCTGCGCCCCCGGAATCGCTCAGCTGAGGAG15.263157894736842No Hit
AGTTGAATGAGCCCCCGAAACAGTCCACGTCTTTCTTGGTTTTGCAGGAA15.263157894736842No Hit
GTGGTGCAGGAGCAGTTGGGGTCCATTTCGAGCCGCGGTAAGGCTGGAGA15.263157894736842No Hit
TAGATAGACAGATGGGAAAGGCAGGCGCGGCCTTCGTTGTCAGTAGTTCT15.263157894736842No Hit
AGTCTGAATGCTCCACTTTTTCAATTCTCTCTCCATTCTTCAGTAAGTCA15.263157894736842No Hit
GTACATGGGACACCGCAGTCCGTGCCGGCGTCCCGCCCGCCAGCGCCCCA15.263157894736842No Hit
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG15.263157894736842No Hit
ATTGAAAGAAAGAGTGGAGGGGTTAACATGGGGCCCACCTCACAACCCAC15.263157894736842No Hit
TGGTTACCCTGATCAAATTCATCCTCCTGCATCTTGCTTACTTGAGTTGG15.263157894736842No Hit
GTGTAGGCTCGTGGGGAAAGGCGGCCCAGCTCAGACTGCTCAGGCCCCTC15.263157894736842No Hit
GAATGAGATGGTGGGAGAGAAGGGCCTTGCACCTGAGGTGGCTGACCGCA15.263157894736842No Hit
TCGACCTCCCCACCCCATCCAACATCTCCGCATGATGAAACTTCGGCTCA15.263157894736842No Hit
GCCCTGGACTTCGAGCAAGAGATGGCCACGGCTGCTTCCAGCTCCTCCCT15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)