FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003640917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003640917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15
Sequences flagged as poor quality0
Sequence length100
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAA213.333333333333334No Hit
GGGCAAGAGGTCCCGGGGAAACGAAACTGGAAACCGACCGCCGCCATATC213.333333333333334No Hit
CTCTAGAATAGGATTGCGCTGTTATCCCTAGGGTAACTTGTTCCGTTGGT213.333333333333334No Hit
GAGAAATACAATGAAGAGGCAATGTAAATCACAAAATAATGATTTTACAA16.666666666666667No Hit
CATCCTATGTGCTCCTCGCTTATCTCACGGCCCAGCCAGCCCCAACCTCG16.666666666666667No Hit
CTCTGGTAATTAAAAACTTATTGTGGCCGGGCACAGTGGCTCACGCCTGA16.666666666666667No Hit
CAATTAATCTTTCCATTTTCGTCTGCGTTTAGTAAATGTGTTAACTAGGC16.666666666666667No Hit
GATTTGGGAAGTCCAACTTACTTTGGCCAGACAGCAGCTAAGCTGGTTCA16.666666666666667No Hit
CTGCAACAATGCTCTGGAAGTCCAAGGGCAGGAGAAGAAGAGCATCCCAC16.666666666666667No Hit
GCCTCCAGCTGCTCCTTCACCTTCTCCTCCACTGCAACCGGTTTGGCCTG16.666666666666667No Hit
GAGAAATACAATGAAGAGGCAATGTCCATCTCAAAATACTGCTTTTACAA16.666666666666667No Hit
CTTTAGATGTAGCATCCACTTCCTTAGTTACCCTTACTTCTTCACCAGCA16.666666666666667No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)