FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003641254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGAGCTGCGCGAGTTCTCATGTCCGGAGGGGCTGTGAGCGTCGAGTCC33.7037037037037033No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA22.4691358024691357No Hit
GCTGTGGGACCCCTGTGCCACCCCATGGGGCAGGGCAGTGCTTAGGAAGT22.4691358024691357No Hit
CAGCAGAACCTTTTATATACTGATAAGTTGAATCTATGGGGTCCACCCAA22.4691358024691357No Hit
GCTTATTACAATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAG22.4691358024691357No Hit
ACACCATGCCGTACAAGCCGGAGGATCTGGCCGCCGTGTCCAACATGGCG22.4691358024691357No Hit
CACCACAGCTCTTCCGACTCCAGCAGCAGCTCCAGCGATTCGGACACGGA22.4691358024691357No Hit
ATACCATTGATCGTTCCGCTCGCGACCGGGGATGCCGCATGGCCGACACC22.4691358024691357No Hit
CTCTTCTCCAGGGAGGAGCTGGAAGCAGCCGTGGCCATCTCTTGCTCGAA22.4691358024691357No Hit
CCCCTGGGTTGTTCACACCCAAGGCCAATTTGACAACATCCTCCTCTCTG22.4691358024691357No Hit
GGGGTTCATCGATGGGCAGGAAGAAGACGCACACGCCCGAGGAGATCGTG22.4691358024691357No Hit
ATCCAGGCGGCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA22.4691358024691357No Hit
TCTCCGAAGTGATGTTCTTCGGCGCGTTCTTCACCGCGCTGTGGTGGGCC11.2345679012345678No Hit
CTGCCGGGGGCCGGGGCGCGGGCGCTGTCGGTGCCCGGCGTGCTCGACGT11.2345679012345678No Hit
ACTTCCTCTCGACTCTGGGCCCAGCGATTCCCACTTCACTAGATTCAGGT11.2345679012345678No Hit
ACTTGGACCATGGTCTTAGTGACTCATATTTCCAGTCATGTTGAACAATT11.2345679012345678No Hit
CCCATGACCCGCCGGGCAGCGTCCCGGTAACCAAATTCGTTGGGTTACCC11.2345679012345678No Hit
AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCA11.2345679012345678No Hit
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAA11.2345679012345678No Hit
TTCTCACTCTGTCACCCAGGCTGGACTGCAGTGGCACAATCTTGGCTCAC11.2345679012345678No Hit
AGCCGGTGACCCGCCTGCTCCGACTGTCGCTGCTCCTGGGCCTGGTGGGC11.2345679012345678No Hit
CTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGA11.2345679012345678No Hit
AATCTGAAGTCAGTAAATGAACTAATCTACAAGCGTGGTTATGGCAAAAT11.2345679012345678No Hit
CTTATGTATTTGGGGTTTACCGTGGGCTCAATGCCGGCAATCCACAGATA11.2345679012345678No Hit
GGGCGGAGTGGCCTTCTGTGGACGAATCAGATTCCTCTCCAGCACCGACT11.2345679012345678No Hit
GGCTTGTTCTCGTCCATGGTCCGATCCTCGACAATCCGCGTTCACAAATC11.2345679012345678No Hit
GTTCCAAAATGTTGATTTCAACGTCCTCTGGATATCTCTTAATTTTGCAT11.2345679012345678No Hit
CCGTTAGGAAAGCCACCGTCGGCGCCATCGCCGCGCCGCCTTCCAGCTTT11.2345679012345678No Hit
GTCTGGGAGATGGAAGCGAAAACTGACCGGGACCTGTGCAAGCCGAATTC11.2345679012345678No Hit
GCACGCACCTCATCACCCTCACGCATCTCATGTCATTACACCGCATTACA11.2345679012345678No Hit
GGTCAAACATGGCAAACACATTGGATGTTGCACGCTGAGGGCGCTTCTTG11.2345679012345678No Hit
ACATTATTCATAGTAGGTACATTCAGTTATGCTACACATGAACGTTCTCA11.2345679012345678No Hit
GTGCGCTGCTGTGCGGGGCTGGGCTGCTCTTCCATGGGATGCTGCTGCTG11.2345679012345678No Hit
ATCATGAAGAGGTCCTCCCGAGTGTTGGAAACGATCCTTGCTTTCTCGAA11.2345679012345678No Hit
GCCTTGAACATCACGATCAAAGCAGCAGGTGCTGTGGTCTCTCAAAATTG11.2345679012345678No Hit
CTCCCGGGATGGGTGTTCCGTATCCCGCCTTCCTCACGGATCGCAGGCGT11.2345679012345678No Hit
ACGTATGCATATATGATCAGTAAGCAGCTCACATTTTTCTGAATGTCAAG11.2345679012345678No Hit
GTCTTCGACATGCGCGAGTTCTCGCTGATCGCAGACGGCGAGGAAATCCA11.2345679012345678No Hit
GAGTACATGGGGAGCTGCGGGAGCGTTTCCGGGGACGGTGCCGCCATGAG11.2345679012345678No Hit
TCTTTAGACTGGTCAGCAAATATCAAAACGAGATCTCAGACAGGAAAATC11.2345679012345678No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTT11.2345679012345678No Hit
TTCCTATTGTTCAGGCTAAGGCAAATTTTTTTGTTTGTTTCTTCAGTTTA11.2345679012345678No Hit
CGCAGGAGAGCCTCGACGGTCGCGTCGGAATAGCTGTCCAAGGCCTCGAT11.2345679012345678No Hit
CTCTATCACCATAAATTAGTTTTACCTATTTTTGAATGTCATATAAATGA11.2345679012345678No Hit
CTTTAAGAACTGCTCAAAGGGGCTTTTACCCCTGAGGTCTTTGGCTCCTA11.2345679012345678No Hit
TATCAACGCAGAGTACATGGGGGAATTCGAGCTCGCATTTTGAAAATTCT11.2345679012345678No Hit
GAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCAC11.2345679012345678No Hit
TTCCTAAGTCCTGCAGTTTGAATTCAGCAATGAGGCAACTAAAATGCACT11.2345679012345678No Hit
CGACCCGCTCGCCGCGGCCCGCCTGGCGAGCGGGCTCGACGAGTTCTGGT11.2345679012345678No Hit
GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC11.2345679012345678No Hit
CAGTTAAGCTCCCCCAAAAAGAGAAACACAGTATAAGGCAGTGTTAGAAA11.2345679012345678No Hit
CTGGATCCTCCGTTCGCGTCCCGGCCATGCCGTTCCCTGCGCCGGGGATC11.2345679012345678No Hit
GAAAAGGAAGTTGAAAAGATTCAAAGGATAGACATCTTCCCAGATTAACA11.2345679012345678No Hit
CACTGGCATGGCCTTCCGTGTCCCCACTGCCAACGTGTCAGTGGTGGACC11.2345679012345678No Hit
GTCATTGGCAACAGCAATTGAAGTGAAGATGATTGACCGCACGCAATTGA11.2345679012345678No Hit
GTGGCTCCCAAGCTCGACCCTGCCTGGGAGAAGCCGAGCGCCAGCTTGGC11.2345679012345678No Hit
GTAATGAGGCGTGCGCCGCCAATATGCACTGTACATTCCACAAGCATTGC11.2345679012345678No Hit
GTTATCAGAAGTCCACTGAACTTCTGATTCGCAAACTTCCCTTCCAGCGT11.2345679012345678No Hit
GCTTCCACCTGGTCGGTGTTGAACACGATGACGATCGTCACGGGGCAGGC11.2345679012345678No Hit
GAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCCTCAC11.2345679012345678No Hit
CCGTCCAGGTTTACTAACGGGCCTCCCGAGTTTCCATAGTTGATGATGGC11.2345679012345678No Hit
GCTGGACCCGTTGCTGCCGCTGCTGGCGCGCGACTTCGGCGCTTCGGTCG11.2345679012345678No Hit
CCCTTCGCGGGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGAG11.2345679012345678No Hit
GCTCTTCCACATTCCATAAATTTCTATCTGGATGTGCACAGACACCTCAA11.2345679012345678No Hit
GAAGAAGACTTTGAATTACGGAAAGAACTGATTGGACAGGTGATGAACCA11.2345679012345678No Hit
TCACTATACCATTGGCAAGGAGATCATTGACCCAGTGCTGGATCGGATCC11.2345679012345678No Hit
GATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG11.2345679012345678No Hit
CCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACC11.2345679012345678No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)