FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003641277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCCAGCTTTTATTTATATTTTGTGCTTTAAAAAGCCTGGAGATTTAAG29.090909090909092No Hit
CCACTACAGGCCCCAGGGACTGCTCGTGCACGGGCGCGGCCGCGACACCC29.090909090909092No Hit
ATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCTTTGCCCGATCCCG29.090909090909092No Hit
CATATTGACAGGTCATGAAAATGAGACCAAAAGATCTCTGGAAGCGATTA29.090909090909092No Hit
TAAGAATCCCTTGGAGATGGCCCCCTTAGTGACTGGCAATGAATTCCTTA14.545454545454546No Hit
GATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCCTCTCC14.545454545454546No Hit
GCCTTAGTCATCCTGGTGAAATGGGACAGAAGTGGTTTTTGGAATATGGC14.545454545454546No Hit
GGCCAGGTCTTCCCAACCTTGGGGCTGTCCTTGTCCATAGCCTGAGTCTC14.545454545454546No Hit
CATTTCCCCCAAGAGAAAGAACCCTTTTCATTAGCAGAGATGAATTGAAA14.545454545454546No Hit
GTTGAGGGGTAGGGGTAAGTGCCAGGTGCCAGCCTCGTTTTAACAGCCAG14.545454545454546No Hit
TATTTTAATCATGCCTAAAGTCCCACCTGGGAAGGCTAAGGACCGGAAGC14.545454545454546No Hit
TCTGTGGATACTGCTGTTTCTTTTTCATTTTCTTCAGCTTCAGCCCTTAA14.545454545454546No Hit
TTTTTTTTCCTAGTGAGAAAACAACCCATTTGAAGAGAAGACCACTAATG14.545454545454546No Hit
CCCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCC14.545454545454546No Hit
GAGCTAATCCAAGGCGTGCTGGGTCTAAGGCTCTGACAATCAGCTGGGAA14.545454545454546No Hit
GGCTGAGGCTGCGGAAGGTCGACCAGGGGCTCTTTGTGCAGTTGGTCCAG14.545454545454546No Hit
CTACAGGCGTGCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGA14.545454545454546No Hit
CCTACAGCCGAGACAAGATGTGATCACAGGAGACTCCAAAATCTCAAACT14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)