FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003641278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTCAGGAAGCTAAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGG29.090909090909092No Hit
CTTTGTCTCACCCAGAAATATGATGGGGGGAATTACCTGCCCTAACCCCT29.090909090909092No Hit
GTACATGGGAGTGCTATGAAGGTGACAGCGTGAGGTGACCCATCTGGCCC29.090909090909092No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC14.545454545454546No Hit
GTCCAAAATAACGGGCACTCAGTGATGATGTTGCTGGAGAACAAGGCCAG14.545454545454546No Hit
TCCCCTTCTTGATCACGAAGCCGACGTGGCCCATGCTGTCCTTGTGCATG14.545454545454546No Hit
GCTCTAGTTCTCTGACACTTCAGCCTATATCACAGCTAACTTCTTCAGTC14.545454545454546No Hit
GTCCAGCCCCTTACTTAAAGATCTGGAAAGCATGAAGACTGGGCTTTTTT14.545454545454546No Hit
GTTCCAGGATATGGCTATAACAACAAACTAATCTTGGTGATATCTGTGAC14.545454545454546No Hit
CATGCAGATTCAGTGACTGGCCTGAGTTTAAGTTCTGAAGGCTCTTATCT14.545454545454546No Hit
GAACTTACAGCCTCAGTTTCCCCATCTGTGCAAGGAATTCCAAGATTCCT14.545454545454546No Hit
TCATAAAGGTAATAAATTACCCCCACTCAAATCCAGATGGATTAGAGCCA14.545454545454546No Hit
GTATTAATAGGTCAAAACCAAAATGACCTAACCCTCCTGGACCTATTTAT14.545454545454546No Hit
CCTCATGCTGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAG14.545454545454546No Hit
CTAATACTCAAGAGTGTCCTTTAATGACTGATCCCTGATCAAGGCTTTGG14.545454545454546No Hit
AAGTAACTTACATAACTCATGCAGTAATTTCTGCAGTTGGGAGATGTTCA14.545454545454546No Hit
ATAGTCGGACGTGCAACAGGATTCAACGCTGCTCTTTTCCCACCCTCCTC14.545454545454546No Hit
GTATTTTCCATGTATCAGGAAAGAGGTGTCTTATGTAGGGAGGGGGCAAG14.545454545454546No Hit
GTTCCAGGATATGGCTATAACAACAAACTAATATTGGTGATATCTTTGAC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)