FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003641505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTTTTTTAACTTTCTTTTTTATTCTTCCTGAGTTATTTCTGTTGGAAA220.0No Hit
GTTGGGAACTGCCCCAACGGCAAACATGTTAGCACAATTGTCAGGGGACC220.0No Hit
AAGCTCTACTGCAGGAAAACAGCCCCCTGATCGGAGACTTCCCAGCCTTC110.0No Hit
TTCAAACACAGTGCTAAAGTAACGGGGGATGAGGGTCCTGCCGATAGTGT110.0No Hit
ATATGGTATTGGGCAAAGAATAGAGAAATAGATCAATGGCAAAGAAGATA110.0No Hit
GCGGATCGCGGTAACCGGCCAGCACATCATGCCCATCGCGGCGTTCCAGC110.0No Hit
GCGTAACGTGTCCGCCGTCGACATCGAGCGGTAGTACATATTAGGGTCTA110.0No Hit
GAGTGGAACGGCATGGAATGGAATGCAATGGAATGGAATGGAATGGAATG110.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)