FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003641761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTTAGGCTTGCAACATCGGCTTTAGAAAACGCCCTGTGTGTGAGCGCG212.5No Hit
CTGGGGAAGAAGAAGTAAGGTAGTTCAAGCTTGCCGGGGGTATGTGGCAT212.5No Hit
CTGCAAGCCCCGCCTTCTGGATTCACGCCATTCTCCGGCCTCAGCCTCCC212.5No Hit
TCTTCGGCTGTTGAGGAGAAATACTATTATGCTGCTTAGGTCCCTGTTCG212.5No Hit
GCCTGAACTTGTCGGAGAAGCACTGCCGCGTCGTGGTAGTCGTCTGGCCT16.25No Hit
GTTGTGGCTCTCGCCGTCGTTGTTGCCCTCGCCGTTGGCCTCGTTGTGCT16.25No Hit
GGACCTCATCGATCATGAGGGTTGAAGCGGGAGCGGCAAACAGAGCAATC16.25No Hit
CACCATAACCGGTGCAAATATGCGAAAGTTGAAATGACCCTGTTTTTCCC16.25No Hit
GCTTGGAGGTAAAGGTGAACTCACCGGTGGTGGCACGGATATGGTGTGCG16.25No Hit
GATCACGTCGGCGCCCAGATCGCCCAGCAGCATGCCGGCGGCCGGGCCCG16.25No Hit
GATCTGGCCGATCGTGGCCAAGCCCTTCGTGTCGCTGGACTCGCCCGGGG16.25No Hit
TCTCAAGGGCTTCGCCTCCCTGATTGTCTCCGCGACGGCCGCGGGTTCCG16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)