FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003641762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGTAAAATGACACCAGAGATTTTTATACTGGTTCGGAGCACCGTCC212.5No Hit
CAGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGATGAAAC212.5No Hit
CTATCAAGCAGGACGCTTTAGCTTCAACGTGAAAGGCGGTCGCTGTGAAA212.5No Hit
GGCGACACCCGCTGGCGGTCGTCCGCCGGCCAACCCGCAGGAGCCACGCA212.5No Hit
GATCAACGACCCGATCGGCTTCGCGCTGTCGTACCAGGCGACGCGCGAGG16.25No Hit
ACCTCGATCGCGAAGACGGGCCCTTCGATATTGACGAGGTTGATCTCGAC16.25No Hit
GAGAAGCACAACGAGGCCAACGGCGAGGGCAACAACGACGGCGAGAGCCA16.25No Hit
GACAACGCCCCGGTCATAAGTCCACCTACGATCAGTGGGAGCCCGAACAG16.25No Hit
GTCGATAATGCTGTCTACGTCAAGGGAGCGGGTGGCGAGGCGGGGCGCTT16.25No Hit
CCTTAGTAAAGGCGGCGGAGGTGATCTTCTCGGCATCGAAGCCCGGGATC16.25No Hit
GGTTGCCCGGGATGACGGTCGGGTCGCCGACGACGCGGGAAAGGGTGCTC16.25No Hit
CTCAATGGCATGCTGCTGGAAGTATCGGCCGGCATCATCCGCGCCGTGGC16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)