FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003641861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2723
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT260.9548292324641938No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA110.4039662137348513No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.3672420124862284No Hit
TATCAACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAA80.29379360998898274No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA70.2570694087403599No Hit
GTGTACACCCTTTTGAGCAATGATTGCACAACCTGCGATCACCTTATACA70.2570694087403599No Hit
GTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTAC70.2570694087403599No Hit
ACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAA60.22034520749173708No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG60.22034520749173708No Hit
TATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAA60.22034520749173708No Hit
GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA60.22034520749173708No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG60.22034520749173708No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.22034520749173708No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG50.1836210062431142No Hit
GTACATGGGTCTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCC50.1836210062431142No Hit
GTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGG50.1836210062431142No Hit
GTACGGCCGTTCAGCCACGAGTCACGGGGTCTAACGCCTACCAGTACTGA50.1836210062431142No Hit
CCAGAAGAGGAGAAGAGGAAACACAAGAAGAAACGCCTGGTGCAGAGCCC50.1836210062431142No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT50.1836210062431142No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG50.1836210062431142No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT40.14689680499449137No Hit
GTTGATATAGTGACGACCTCAGGAGCAACAGGTGGGTTAAAAACCCGTGG40.14689680499449137No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA40.14689680499449137No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA40.14689680499449137No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG40.14689680499449137No Hit
ATCCACAATCACCATTCATACGTCTCCCCCTTTTTAAAGGCTTGTTTCAA40.14689680499449137No Hit
GCTACCACCAAGCAGCCTCCTAAGCCTATAGGCACCAGTGGAGGTTCCCG40.14689680499449137No Hit
GTCCTCCATAGCAGCCAAGATGATGTCCGCGGCGGCCATTGCCAATGGGG40.14689680499449137No Hit
GTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTC40.14689680499449137No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAA40.14689680499449137No Hit
ACATGTTATAAAAGAGGTTTAGTCAAAAAGACCAAAGCCCATGTCATCAT40.14689680499449137No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG40.14689680499449137No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT40.14689680499449137No Hit
GATGAAGGCTACAAAGTAAGCGCAAGTACCCACGTAAAGACGTTAGGTCA40.14689680499449137No Hit
ATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAA40.14689680499449137No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA40.14689680499449137No Hit
CCAGTAGGCCGCGTAGAACTCCATCATCGTGAACTCGGGGTTGTGGCGCA40.14689680499449137No Hit
GCGTGAGCTCGCCCGCCAGAAGAATATGAAAAAGCAGAGCGACTCGGTTA40.14689680499449137No Hit
GGCTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAACTACGAACGC40.14689680499449137No Hit
AACGCAGAGTACATGGGAGCAGGACCTACCCCACGCACACCCCTACCCCT40.14689680499449137No Hit
TACTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCA40.14689680499449137No Hit
ATTTAAAGGAGCATCTCAGTTACGTGTGGCGGACAAAAAAAAGGAGCAGA40.14689680499449137No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA40.14689680499449137No Hit
GACATACAGAAATAGTCAAACCACATCTACAAAATGCCAGTATCAGGCGG40.14689680499449137No Hit
TCAGAGCATTGACCGTAGTATACCCCCGGTCGTGTAGCGGTGAAAGTGGT30.11017260374586854No Hit
GTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAGCGAAA30.11017260374586854No Hit
GAACGAGACTGCACGGATTGTTTTAAGAAAATGGCAGACAAACCAGACAT30.11017260374586854No Hit
CCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGGA30.11017260374586854No Hit
TCAGTTGTCCGTATACCAAGACGTCTAAGGGCGGTGTACACCCTTTTGAG30.11017260374586854No Hit
GTACATGGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAA30.11017260374586854Clontech Universal Primer Mix Long (95% over 21bp)
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG30.11017260374586854No Hit
GTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAAC30.11017260374586854No Hit
ATATGATTCATTTGGGGCAGCCATCCCAATTGTATCAGCGACGCTCAATT30.11017260374586854No Hit
CTACAGGAGGAAACGCGAGCGTGGTGGGACTGGCTCCAGGCACACAGGCG30.11017260374586854No Hit
GTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTC30.11017260374586854No Hit
ATCCAAGACCCAGCGAGCAGCCAAGCTCAGCGCAACCTCCGGGCTTCTCG30.11017260374586854No Hit
GAGTACATGGGGTGCAGCGTGCCGGTGGCCTTGCGTGCGGCATGGCGCAG30.11017260374586854No Hit
ACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGATCGGCCCGAGG30.11017260374586854No Hit
CCTCTGCGCCATGAGAGCCAAGTGGAGGAAGAAGCGAATGCGCAGGCTGA30.11017260374586854No Hit
GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT30.11017260374586854No Hit
ACGCAGAGTACATGGGCATCAACCTGCGCCGTCTTGTTAACTTGTCATAT30.11017260374586854No Hit
CTCATCCACCTTATAATATTTCAGGACAGCCAGCTTAACCTTCTTTCTCT30.11017260374586854No Hit
GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA30.11017260374586854No Hit
CTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTTACCACCT30.11017260374586854No Hit
GTACATGGGCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTC30.11017260374586854No Hit
AGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGC30.11017260374586854No Hit
TACAGTTACTTGTCTTCTGGTTTGTTGAAACAGTAAGTCAGACAACATTT30.11017260374586854No Hit
CCCCTGGGGGGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCT30.11017260374586854No Hit
GACTAGGCGCATAGTCGCCATTCACAGATTTGCTCGGCAATCAGTACTGG30.11017260374586854No Hit
ATCAAAAGGGACAAGCATCAAGCACGCAGCAATGCAGCTCAAAACGCTTA30.11017260374586854No Hit
ATAGCAAACGGTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGG30.11017260374586854No Hit
GTGAAATATTAGTTGGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAA30.11017260374586854No Hit
TCAATGTACTGGCCCGTCAGGCCTCAGTAGCTGGCCACGTTGACAAAGAG30.11017260374586854No Hit
GGTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAA30.11017260374586854No Hit
CAAGCAATTCTTCCACCTCAGCCTCCCAAAGTGCTGAGATTACTGGCTTG30.11017260374586854No Hit
ACACTACAATGCAGACTCCTCTTCCAGAGAAAGGTCTTTCAGAGACAGGG30.11017260374586854No Hit
GTACATGGGATCTTCCGACGACATTGATTGCTGCATTCCGCTCAACGCTT30.11017260374586854No Hit
AAGATGGACGTACTTTGTCTGACTACAATATTCAAAAGGAGTCTACTCTT30.11017260374586854No Hit
GTATCAACGCAGAGTACATGGGCGTAAAGACGTTAGGTCAAGGTGTAGCC30.11017260374586854No Hit
GATCAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTAC30.11017260374586854No Hit
ATGGGGGACGTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGC30.11017260374586854No Hit
CCTGTGCCTGTGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCTCC30.11017260374586854No Hit
GTCCTCTGCCAGCCTACAGGAGGAAAAGCAAGGCTTACAGAAGGATGTTC30.11017260374586854No Hit
TCTGGGCTTCTGGCACCACAGGCCTCCAGCTATGGGGTCCAGGGTCTGAA30.11017260374586854No Hit
ATCAACGCAGAGTACATGGGAACAACCGAAACCAAATAATTCAAGCACTG30.11017260374586854No Hit
GAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCC30.11017260374586854No Hit
GACCCCCTTCGCGGGGGGGATGCGTGCATTTATCAGATCAAAACCAACCC30.11017260374586854No Hit
CTGAAAATGGTGTGTGGCGTCGCGCGCGCCAGCTATCGTCAGTGCCTTTA30.11017260374586854No Hit
GTATCAACGCAGAGTACATGGGACGGCCATCTGCCCAGTCCTTGACTCGT30.11017260374586854No Hit
CTTCTCTGCAGGGCGAGGGGCAGGGAGCTAGTAGAACCTCGCAATGACAG30.11017260374586854No Hit
ATGTAAAAGGCCCCGTGCGCGAGGGCGACGTGCTCACCCTTTTGGAGTCA30.11017260374586854No Hit
ATCTAAAACACTCTTTACGCCGGCTTCTATTGACTTGGGTTAATCGTGTG30.11017260374586854No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT30.11017260374586854No Hit
CTTTTGAGCAATGATTGCACAACCTGCGATCACCTTATACAGAATTATCA30.11017260374586854No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA30.11017260374586854No Hit
ATCATTTACGGGGGAAGGCGCTTTGTGAAGTAGGCCTTATTTCTCTTGTC30.11017260374586854No Hit
GTGCACCATCTGCACAGAGTACTGCCCCAGCCTCTCCTCCATGCAGAAGC30.11017260374586854No Hit
CCTGTATGCGGCACCCCTGGGGGGTGACCTTGGGTTGGGGTCACAACCTC30.11017260374586854No Hit
CCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCG30.11017260374586854No Hit
GATCACCGGCGTGCCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCC30.11017260374586854No Hit
CCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCA30.11017260374586854No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA30.11017260374586854No Hit
CTCCGTGCCCGACCATGTCGTCTGGTCCCTGTTCAACACCCTCTTCATGA30.11017260374586854No Hit
GAGTTGCCTCGGGCAGCCTTGTGGCTACTCTGCAGTCACTGGGAGCAACT30.11017260374586854No Hit
TTATTGGGGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATTGA30.11017260374586854No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.11017260374586854No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG30.11017260374586854No Hit
GTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCATCGGATCACCGGCG30.11017260374586854No Hit
GTATCAACGCAGAGTACATGGGCCTTCCGCAGTCAAAACCGCGCAATTAT30.11017260374586854No Hit
TCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGC30.11017260374586854No Hit
GGATTACCCGGCCCTCTTCATTGTCGAAAGATTGGGAACCGCCTCTGGCT30.11017260374586854No Hit
GCACAGGCCAGAGCGATGATTCTGACATTTGGGATGATACAGCACTGATA30.11017260374586854No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT30.11017260374586854No Hit
ACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCCTACATACT30.11017260374586854No Hit
AAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGAACACTACGAGCC30.11017260374586854No Hit
GTGCCATGGGCTTCACTGCGGCGGGAATCGCCTCGTCCTCCATAGCAGCC30.11017260374586854No Hit
GTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGCGAGTGGGA30.11017260374586854No Hit
GAATATAGCAAACGGTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTT30.11017260374586854No Hit
GTATCAACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAA30.11017260374586854No Hit
GTATCAACGCAGAGTACATGGGGCGGTGCGGAGGTCAGGGACAAGATGGT30.11017260374586854No Hit
GATTTAATTGCAACGGCATCTGAAAATGGTGTGTGGCGTCGCGCGCGCCA30.11017260374586854No Hit
GGTATATTTCACCCCAGGTATATTTGGGATAGTTGGCTCCTCGCTGGGTC30.11017260374586854No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA30.11017260374586854No Hit
AAAAAAAGGAGCAGATTGTGACAGACCATTCCCATCGGCCAAGTGGTCGA30.11017260374586854No Hit

[WARN]Adapter Content

Adapter graph