FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003641862

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641862
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2723
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT250.9181050312155711No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA160.5875872199779655No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.44069041498347417No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA80.29379360998898274No Hit
ACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAA70.2570694087403599No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG70.2570694087403599No Hit
GATTGTGACAGACCATTCCCATCGGCCAAGTGGTCGAACCCGACATCCAA60.22034520749173708No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT60.22034520749173708No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG60.22034520749173708No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG50.1836210062431142No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA50.1836210062431142No Hit
GTACATGGGAACACATCCAAGCTTAAGACGGTGAGGTCAGCTTCACATTC50.1836210062431142No Hit
GTACATGGGTCTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCC50.1836210062431142No Hit
GGTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAA50.1836210062431142No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT50.1836210062431142No Hit
GTACATGGGAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACAAT50.1836210062431142No Hit
TATCAACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAA50.1836210062431142No Hit
CTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTG50.1836210062431142No Hit
GGGTAAAACGCAAGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGA50.1836210062431142No Hit
ATTTCACCCCAGGTATATTTGGGATAGTTGGCTCCTCGCTGGGTCAGGAT50.1836210062431142No Hit
GGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCT50.1836210062431142No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA50.1836210062431142No Hit
GGATTTATGTCCATGATTCGTGCAAATAGCTATCCAGGGATGGACAGCCA50.1836210062431142No Hit
GTATCAACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAA50.1836210062431142No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG40.14689680499449137No Hit
GTATCAACGCAGAGTACATGGGGTATCAACGCAAAAAAAAAAAAAAAAAA40.14689680499449137No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.14689680499449137No Hit
CCTTTGAAGTATACTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAG40.14689680499449137No Hit
GTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAA40.14689680499449137No Hit
ATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAA40.14689680499449137No Hit
GTATCAACGCAGAGTACATGGGAGATTCCGGAAAGGGGAAGAGCAGCCAA40.14689680499449137No Hit
ATCAACGCAGAGTACATGGGATAGTGGCAGCTCCATCTCAGCTTTTGGTC40.14689680499449137No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTT40.14689680499449137No Hit
TATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAA40.14689680499449137No Hit
TGCCCATGGTGCTCAGTGCCATGGGCTTCACTGCGGCGGGAATCGCCTCG40.14689680499449137No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAG40.14689680499449137No Hit
TATCAACGCAGAGTACATGGGATGTTGAGCCTTTTTGGCCTGGCTTGTTT40.14689680499449137No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG40.14689680499449137No Hit
GTCCAGGGCAGAGGACCAACATGGGCATTTTGTTTATGAGCAAGGTGGGT40.14689680499449137No Hit
TCTCAGTTACGTGTGGCGGACAAAAAAAAGGAGCAGATTGTGACAGACCA40.14689680499449137No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG40.14689680499449137No Hit
GGTATCAACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAA40.14689680499449137No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA40.14689680499449137No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA40.14689680499449137No Hit
GTCATGGGCAGAGCTCCTGGCCTCAGTGATGCCTCCTGATCTATCCATAG30.11017260374586854No Hit
GAGTACATGGGACCACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGC30.11017260374586854No Hit
GAACACTACGAGCCACAGCTTAAAACTCAAAGGACCTGGCGGTGCTTCAT30.11017260374586854No Hit
CCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGGA30.11017260374586854No Hit
TGTTACGACTTGTCTCCTCTATATAAATGCGTAGGGGTTTTAGTTAAATG30.11017260374586854No Hit
AAATTGGATGTATGGAAAAATAGACTGCAGAAAAGGGGAACTCATTTAGC30.11017260374586854No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA30.11017260374586854No Hit
CCTGCGCATCGCGCCGGAGCTGTATCTCAAGCGCCTGGTGGTCGGCGGCT30.11017260374586854No Hit
GTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAAC30.11017260374586854No Hit
GGTCTACAAGACGCTACTTTCCCCTATCATAGAAGAGCTTATCACCTTTC30.11017260374586854No Hit
ATTTCAAAGATTTTTAGGGGAATTAATTCTAGGACGATGGGCATGAAACT30.11017260374586854No Hit
CTAAAACACTCTTTACGCCGGCTTCTATTGACTTGGGTTAATCGTGTGAC30.11017260374586854No Hit
TCTCTGCAGGGCGAGGGGCAGGGAGCTAGTAGAACCTCGCAATGACAGCC30.11017260374586854No Hit
GTGCACGCAGGTGCGCGTGGAATTCATGGACGACACGAGCCGATCCATCA30.11017260374586854No Hit
GTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGC30.11017260374586854No Hit
AGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAAGGACTTAAAGG30.11017260374586854No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.11017260374586854No Hit
GGCCGCGAGTTTGGGAATCTGACGCGGATGCGGCATGTGATCAGCTACAG30.11017260374586854No Hit
GTTTCCCACTCATCTTGACTCAGAGTGCTTTTAGTGCTGCTTCCTCCTGA30.11017260374586854No Hit
GGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCT30.11017260374586854No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGT30.11017260374586854No Hit
CACCAAGGTCCTGGGCAGGACCGGTTCTCAGGGACAGTGCACGCAGGTGC30.11017260374586854No Hit
GGTCAGGGTTGTACAAAAAAAAAAAAAAAAAAAATCCAGGTTTATATAGG30.11017260374586854No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG30.11017260374586854No Hit
GGATATTCTGGCTCTGGGGCCCTCTCCACCACCACTCACAGTAGCCTTGC30.11017260374586854No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAA30.11017260374586854No Hit
ACGCAGAGTACATGGGAAGCACTGGTATCAACGCAAAAAAAAAAAAAAAA30.11017260374586854No Hit
GGGCAGCAACAGTCGCAGGAGATGATGGAGGTTGACAGGCGGGTCGAGTC30.11017260374586854No Hit
CAATAATGTCTGTCAAAGTGACTTGCCATAAACACCCCAGCACCACATTC30.11017260374586854No Hit
GTACATGGGCTTTCTGGTCTCGGCCGCAGAAGCGAGATGACGAAGGGAAC30.11017260374586854No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.11017260374586854No Hit
GTGTTTATTGAGATGGTTTCCCACTCATCTTGACTCAGAGTGCTTTTAGT30.11017260374586854No Hit
ATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGATCA30.11017260374586854No Hit
GCCAGAAATATTGTCCTTGCGCCAAACAAGCGGGGCATTGAGCGTGTTTA30.11017260374586854No Hit
TTACCCACCACAACGCGCTGGACCAGGAGATGTTCCTGCGCATCGCGCCG30.11017260374586854No Hit
ACATGGCGGCGGAACGCGGCGCGGGGCAGCAACAGTCGCAGGAGATGATG30.11017260374586854No Hit
GTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAA30.11017260374586854No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT30.11017260374586854No Hit
CTTTTGAGCAATGATTGCACAACCTGCGATCACCTTATACAGAATTATCA30.11017260374586854No Hit
GGAGGGCACTCTCGACGAAGGCGACTAATTTTGCCATTCTCATCCACCTT30.11017260374586854No Hit
GTGTATGAGTTGGTCGTAGCGGAATCGGGGGTATGCTGTTCGAATTCATA30.11017260374586854No Hit
TTCTGCTGCCGCCCGCAAGCAGAGGGACTCGGAGATCATGCAGCAGAAGC30.11017260374586854No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG30.11017260374586854No Hit
AACCACATCTACAAAATGCCAGTATCAGGCGGCGGCTTCGAAGCCAAAGT30.11017260374586854No Hit
ATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGA30.11017260374586854No Hit
GGTCCTTTGAGTTTTAAGCTGTGGCTCGTAGTGTTCTGGCGAGCAGTTTT30.11017260374586854No Hit
CCTGTATGCGGCACCCCTGGGGGGTGACCTTGGGTTGGGGTCACAACCTC30.11017260374586854No Hit
GTTCTCAGGGACAGTGCACGCAGGTGCGCGTGGAATTCATGGACGACACG30.11017260374586854No Hit
TATCAACGCAGAGTACATGGGAGATTCCGGAAAGGGGAAGAGCAGCCAAC30.11017260374586854No Hit
CCTCTAGAGGGATATGAAGCACCGCCAGGTCCTTTGAGTTTTAAGCTGTG30.11017260374586854No Hit
CCCCCGGTCGTGTAGCGGTGAAAGTGGTTTGGTTTAGACGTCCGGGAATT30.11017260374586854No Hit
TCCTAGAACCAGGCGACCTGCGACTCCTTGACGTTGACAATCGAGTAGTA30.11017260374586854No Hit
TCGTAGGAGTGGTGGCTAAGGCACCGCAGGGAATTTTAGCCGGATCTAGA30.11017260374586854No Hit
CTTCAGACTCCTCCTTCTTCTCATCTTTCTTCTCCTCTGCTGCAGCAGGG30.11017260374586854No Hit
GGGCAAGAGGGTTGGACACGAAGCCACAAAGCTACTTGGGTTCCTCCTTC30.11017260374586854No Hit
TCTTGCCACCTCATGGGCTACACCTTGACCTAACGTCTTTACGTGGGTAC30.11017260374586854No Hit
TCATAATCCTCTCTCAAGGACTTCAAACTCTACTCCCACTAATAGCTTTT30.11017260374586854No Hit
ATTAAAAAGAAAGCGAGAGTTCAGGGACTCTGGCGATAAAGCTGCCGGAG30.11017260374586854No Hit
GGGCTGCATCTGCAAAGGGGCGTCGGACAAGTGCAGCTGCTGCGCCTGAT30.11017260374586854No Hit
GGGTCTCGAAGAGGACGGGGGTAGGAAATCCTCCAGGATCTTAGGAAATT30.11017260374586854No Hit
GAAGGGAGAAAGGGAAAAAGCGGGAAGAGTCGAGAAGGCTGAGTGTTAAG30.11017260374586854No Hit
ATTGGGGGGGGGTCCCTTCAGAGACCCACAGGCCGGTGGCATCGGCGCGG30.11017260374586854No Hit
GGTATCAACGCAGAGTACATGGGGACCACGCCTCCTCCAAGTCCCAGCGA30.11017260374586854No Hit
CTTTATTAATTTATGTAGGAAGCCAAAAATAGGAAATAAAAAGATCCGGA30.11017260374586854No Hit
GTACATGGGCTGATCAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAA30.11017260374586854No Hit
ACCCAGCATGGTTTGTTCTAATGCTTCTTGTTGGCAGCTGCCACCTGTCC30.11017260374586854No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.11017260374586854No Hit

[WARN]Adapter Content

Adapter graph