FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003641956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003641956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3269
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC130.39767513000917715No Hit
GAAGATGATTGACCGCACGCAATTGATATTAGATATTTTTGCAAAGCGGG110.336494340776996No Hit
CTATGCGCCTAGTCAACCAGATGTGTGCTAGCCCGTCGAGACTGAAAAGC110.336494340776996No Hit
CAATTGATATTAGATATTTTTGCAAAGCGGGCGAGAACGAGAGAAGGCAA100.3059039461609055No Hit
GTATCGGCTTCTATGGCGAATGACAGTGGAAAGCTGTGTGTTGATTTCAT80.2447231569287244No Hit
CAGTAGGATTTATTCAGGATCTTCCGACGACATTGATTGCTGCATTCCGC70.21413276231263384No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG70.21413276231263384No Hit
GAACTCGGATAGGTCTCAGAAAAACGAAATATAGGCTTACGGTAGGTCCG70.21413276231263384No Hit
GTTAGGGCAGCGTCTGAGGAAGTTTGCTGCGGTTTCGCCTTGACCGCGGG70.21413276231263384No Hit
GCCCTAACTGCGCAGTTAATAATTCTGGCAATTCGTCTCCACACTAGAAG70.21413276231263384No Hit
GTATAGCCGACAAGCGCAATTTGAAGCACACCGTTTTTCTTTCTTCTTTC70.21413276231263384No Hit
CCCTGAGACAGAGTCGCTATCGTTATGTCTCCTTCCCGCGGTCAAGGCGA70.21413276231263384No Hit
CTCCAGATTACTTCCATTTCCGCCCAAGCTGCTCACAGTATACGGGCGTC70.21413276231263384No Hit
CGCAAGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGAGTCACGGG70.21413276231263384No Hit
GTCTGAGGAAGTTTGCTGCGGTTTCGCCTTGACCGCGGGAAGGAGACATA60.18354236769654328No Hit
TAGTAGCCTAGAGCGCCAGGGGCGGAAATTCGCCTGAAAAGTTTTGCCGG60.18354236769654328No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCT60.18354236769654328No Hit
GTTAATAATTCTGGCAATTCGTCTCCACACTAGAAGTCGACGAACAACGA60.18354236769654328No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT60.18354236769654328No Hit
GTGGAAAGCTGTGTGTTGATTTCATGAATGCGATTTCTGATATGGCGGCG60.18354236769654328No Hit
AGCCGATACCGTGAAAGAAGAAAGAAAAACGGTGTGCTTCAAATTGCGCT60.18354236769654328No Hit
CAACGAAGAGCGACGATGCCCGTTTCAGGTGGTCCTCAGCGTACGGCGGG60.18354236769654328No Hit
ATATAGATTGGCGCTAGTAGATCACAGAACAACCGCCGCATACGGCCGAT60.18354236769654328No Hit
TCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTGGC60.18354236769654328No Hit
ATTGATATTAGATATTTTTGCAAAGCGGGCGAGAACGAGAGAAGGCAAAC60.18354236769654328No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT60.18354236769654328No Hit
ATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAA60.18354236769654328No Hit
ATTGAAGTGAAGATGATTGACCGCACGCAATTGATATTAGATATTTTTGC60.18354236769654328No Hit
CTACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCTTTGCCCG60.18354236769654328No Hit
CGTTTCAGGTGGTCCTCAGCGTACGGCGGGACCTCTGAGAATTGGGATAC60.18354236769654328No Hit
GGTGTACACCGCCCTTAGACGTCTTGGTATACGGACAACTGATGGACCCA60.18354236769654328No Hit
GTCGCCAAGTCAGCTGAAGTCATTGGCAACAGCAATTGAAGTGAAGATGA60.18354236769654328No Hit
GTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAGCGAAA50.15295197308045275No Hit
TTCCTGGAGGAATAGGTACCAAGAAAAAAACGAACCTTTGGGTTCCAGAG50.15295197308045275No Hit
ACCTACAACTTGCGCCAATTATCGAGCTGGTAGACGACCAGCGCTGACGA50.15295197308045275No Hit
GGGGATAATTGCGCGGTTTTGACTGCGGAAGGAAGCCAAGGCCCACCTAA50.15295197308045275No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC50.15295197308045275No Hit
GAGCTAGCATCTCTGACGAAAACAGCAGACGGAAAAGTACTGACCAGCGT50.15295197308045275No Hit
GTCCAGTCATGACCTCGATCCATCGCGTATAGGGACGCCCCCTGCTCGCG50.15295197308045275No Hit
AGCAGGGGGCGTCCCTATACGCGATGGATCGAGGTCATGACTGGACACTG50.15295197308045275No Hit
GATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTTCCGCCCCTGG50.15295197308045275No Hit
GTAATATAGATTGGCGCTAGTAGATCACAGAACAACCGCCGCATACGGCC50.15295197308045275No Hit
TCTAGGCATGGAATCTTATGCCAGCTAACGGAACAAGCTTTGTGCCATTC50.15295197308045275No Hit
CTCTTCGTTGTTCGTCGACTTCTAGTGTGGAGACGAATTGCCAGAATTAT50.15295197308045275No Hit
GGTTGATCCCTTGTCCCGTCAGACGCGGCAGTGCATATTGCAGCTGAGCC50.15295197308045275No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC50.15295197308045275No Hit
CTGATGGACCCACGTTGCGAGTCCAGTAAATCAGGACGGGGATAATTGCG50.15295197308045275No Hit
GAATGCAGCAATCAATGTCGTCGGAAGATCCTGAATAAATCCTACTGTAT50.15295197308045275No Hit
GTCTCAGGGGATCTGCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGC50.15295197308045275No Hit
CATCTAGGCATGGAATCTTATGCCAGCTAACGGAACAAGCTTTGTGCCAT50.15295197308045275No Hit
GCTCAATTTGAAGTTTGCCTTCTCTCGTTCTCGCCCGCTTTGCAAAAATA50.15295197308045275No Hit
TTCTGATATGGCGGCGGTCGGTTTCCAGTTTCGTTTCCCCGGGACCTCTT40.1223615784643622No Hit
GGCTAGCATGTGTAGTGCACCATATCATATCCAAGATAGTGTAGGACTCG40.1223615784643622No Hit
GAATAAATCCTACTGTATCTGAAAGAAGAACACTGTAGCCGCTTGGCAGG40.1223615784643622No Hit
GCTATAACCCGCAGACCCGAGCGAAAGCGGCGGTCCTTACAAGTCCGCTC40.1223615784643622No Hit
ACATATATAGGAAAAGGGAAGGTAGAAGAGCTGAAGGCACTCGTGGAAGA40.1223615784643622No Hit
GTCCCGGGGAAACGAAACTGGAAACCGACCGCCGCCATATCAGAAATCGC40.1223615784643622No Hit
GCGGGCGAGAACGAGAGAAGGCAAACTTCAAATTGAGCTGGCTCAGCTGC40.1223615784643622No Hit
TGATTGCACAACCTGCGATCACCTTATACAGAATTATCAATCAAGCTCCC40.1223615784643622No Hit
GGATCAACCTTTCCCGGCAAGGCGGAGGAATTGGGGCAAGAGGTCCCGGG40.1223615784643622No Hit
GTATCAACGCAGAGTACATGGGGGAATTCGAGCTCGCATTTTGAAAATTC40.1223615784643622No Hit
GCGCGGTTTTGACTGCGGAAGGAAGCCAAGGCCCACCTAAAGTATGCTGC40.1223615784643622No Hit
AGCCAAGGCCCACCTAAAGTATGCTGCAAACATATGCAGATCCCCTGAGA40.1223615784643622No Hit
GTTCAACCGCCTGACGAGTGCTGACAGCTATGAAGAAGACCTCCTGTTTG40.1223615784643622No Hit
GTGTTGATTTCATGAATGCGATTTCTGATATGGCGGCGGTCGGTTTCCAG40.1223615784643622No Hit
ACCGTAAGCCTATATTTCGTTTTTCTGAGACCTATCCGAGTTCAGTGCGA40.1223615784643622No Hit
CCTGACGAGTGCTGACAGCTATGAAGAAGACCTCCTGTTTGCCACGCTGG40.1223615784643622No Hit
ATCATATCCAAGATAGTGTAGGACTCGTCGCATTGGATGACGATGCCTAG40.1223615784643622No Hit
TTTATGAACTAGCCTATCGCAGACGGTATCAACAGGAACATCCTCGTGTT40.1223615784643622No Hit
CCATAGAAGCCGATACCGTGAAAGAAGAAAGAAAAACGGTGTGCTTCAAA40.1223615784643622No Hit
ACGGACAACTGATGGACCCACGTTGCGAGTCCAGTAAATCAGGACGGGGA40.1223615784643622No Hit
GTCCTTACAAGTCCGCTCCTCGGGGAGCTTGATTGATAATTCTGTATAAG40.1223615784643622No Hit
CCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTTGATCACGTTTATTG40.1223615784643622No Hit
TTGTACGGCCGTTCAGCCACGAGTCACGGGGTCTAACGCCTACCAGTACT40.1223615784643622No Hit
ATCCTGAATAAATCCTACTGTATCTGAAAGAAGAACACTGTAGCCGCTTG40.1223615784643622No Hit
CCATTTTTCTGGTCATCGGGTCCAGCGTGGCAAACAGGAGGTCTTCTTCA40.1223615784643622No Hit
ATATCAGAAATCGCATTCATGAAATCAACACACAGCTTTCCACTGTCATT40.1223615784643622No Hit
AATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTC40.1223615784643622No Hit
GTCCCTCAGCGTGACGCAGTAAACTAGTAGCATCCCGATCTTTTCCCTAT40.1223615784643622No Hit
TCCCTTGTCCCGTCAGACGCGGCAGTGCATATTGCAGCTGAGCCAGCTCA40.1223615784643622No Hit
CTGAAAAGCTATAACCCGCAGACCCGAGCGAAAGCGGCGGTCCTTACAAG40.1223615784643622No Hit
CCTTACAAGTCCGCTCCTCGGGGAGCTTGATTGATAATTCTGTATAAGGT40.1223615784643622No Hit
GTGCTGACAGCTATGAAGAAGACCTCCTGTTTGCCACGCTGGACCCGATG40.1223615784643622No Hit
GTAAACTAGTAGCATCCCGATCTTTTCCCTATCTAATTCACCTCCTATTA40.1223615784643622No Hit
GGGTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGA40.1223615784643622No Hit
GTTTTGACTGCGGAAGGAAGCCAAGGCCCACCTAAAGTATGCTGCAAACA40.1223615784643622No Hit
TCCCAATTCTCAGAGGTCCCGCCGTACGCTGAGGACCACCTGAAACGGGC40.1223615784643622No Hit
ATTCTGTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGT40.1223615784643622No Hit
GGGTAAAACGCAAGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGA40.1223615784643622No Hit
CTTTTGAGCAATGATTGCACAACCTGCGATCACCTTATACAGAATTATCA40.1223615784643622No Hit
AGGCAGTGCCGCTGAACATTCCCGAACTCGTGGTGAACCGGACGCTGGTG40.1223615784643622No Hit
GTATCAACGCAGAGTACATGGGGGAATTCTCCAGATTACTTCCATTTCCG40.1223615784643622No Hit
TTCCAGAAACGTGTATCACATCTAGGCATGGAATCTTATGCCAGCTAACG40.1223615784643622No Hit
GTGTATCACATCTAGGCATGGAATCTTATGCCAGCTAACGGAACAAGCTT40.1223615784643622No Hit
GAATCAATTAAATGCAGAATTAAATCCGCTTCTTTTACTTCCTCAAGCGT40.1223615784643622No Hit
CCCTTTGCCCGATCCCGGAAGATACGCTCTAAGCTCGGCAATCGCTCTTG40.1223615784643622No Hit
ATATGGCGCACTACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCC40.1223615784643622No Hit
ATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCTGGGGAGATTA40.1223615784643622No Hit
GCACAAAGCTTGTTCCGTTAGCTGGCATAAGATTCCATGCCTAGATGTGA40.1223615784643622No Hit
GCATCGGGATATCATCTGCTTCAAGCTCCTCAAGCAGCCGAAGCACTGTT40.1223615784643622No Hit
CTTTTTAATGTGTAAGATAATCGTTGTAACATCTTCCACAACGCCTTCAA40.1223615784643622No Hit
GAAGTCGACGAACAACGAAGAGCGACGATGCCCGTTTCAGGTGGTCCTCA40.1223615784643622No Hit
ATAGAAGCCGATACCGTGAAAGAAGAAAGAAAAACGGTGTGCTTCAAATT40.1223615784643622No Hit
TAACAGTTCTTGGCGCAAATAGCGCTGAATCGCTTCTTTAAAGGCTGCAG40.1223615784643622No Hit
GTAGGATTTATTCAGGATCTTCCGACGACATTGATTGCTGCATTCCGCTC40.1223615784643622No Hit
ATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTTGATCACG40.1223615784643622No Hit
GTGGTGTGGTGCCCCCGACCTACAACTTGCGCCAATTATCGAGCTGGTAG40.1223615784643622No Hit
CAATTATCCCCGTCCTGATTTACTGGACTCGCAACGTGGGTCCATCAGTT40.1223615784643622No Hit
CGGCTACAGTGTTCTTCTTTCAGATACAGTAGGATTTATTCAGGATCTTC40.1223615784643622No Hit
GATCACAGAACAACCGCCGCATACGGCCGATTGTCGCAGCCCGGGTCGAT40.1223615784643622No Hit
GTTCCCCGGGGTCAGGGCCGCTGGTATTTGCTGTAAAGAGGGGCGTTGAG40.1223615784643622No Hit
GTACATGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAGCTA40.1223615784643622No Hit
CAATTTGAAGTTTGCCTTCTCTCGTTCTCGCCCGCTTTGCAAAAATATCT40.1223615784643622No Hit
GCGGGACCTCTGAGAATTGGGATACAGGACCCAAAAGGCTGAAAGGGGGC40.1223615784643622No Hit
CTATCGTTATGTCTCCTTCCCGCGGTCAAGGCGAAACCGCAGCAAACTTC40.1223615784643622No Hit
AACTAGTAGCATCCCGATCTTTTCCCTATCTAATTCACCTCCTATTAGGA40.1223615784643622No Hit
CAATTGAAGTGAAGATGATTGACCGCACGCAATTGATATTAGATATTTTT40.1223615784643622No Hit
ACGCTGGACCCGATGACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGT40.1223615784643622No Hit
GGTCCGAATGGCACAAAGCTTGTTCCGTTAGCTGGCATAAGATTCCATGC40.1223615784643622No Hit
ATTATTAACTGCGCAGTTAGGGCAGCGTCTGAGGAAGTTTGCTGCGGTTT40.1223615784643622No Hit
CTGCAAACATATGCAGATCCCCTGAGACAGAGTCGCTATCGTTATGTCTC40.1223615784643622No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)