FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003642117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length140
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTCCGCGGTTACCTGGGGTCTTGGCTACTTTGGCCAACCACATATTA216.666666666666664No Hit
CTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCTGTCTCTTATAC216.666666666666664No Hit
GCCCGGAGCCCCGCGAACTGGCGCCGGCTTCCTCAGCTCTGGGCGGTGCG18.333333333333332No Hit
GCGCAGTTGGTGGCGCGGCTGCTTTGCAAGCAGTATGTCAGGGGTTCGAG18.333333333333332No Hit
GCGCAGTTGGTAGCGCGGCTGCTTTGCAAGCAGTATGTCAGGGGTTCGAG18.333333333333332No Hit
GAATTTCACCTCTAGCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCA18.333333333333332No Hit
GTTCAAGAGATTCTCCTGCCTCAGCATCCCAAGTAGCAGGGATTACAGGC18.333333333333332No Hit
GGCCACTGAGGCCCGCGGTGCGGGTAGGCCATCGCTGAGTTCCCCCGGCG18.333333333333332No Hit
GTGATCCTGCTGGCCGCGGCGTTCGTGATGTTCTCCGCGACGCAGGACAT18.333333333333332No Hit
AGCGTGTAGCCCGCCGTCGTATCCCCGACCCGAAGGCGGTTCAGGGTCTG18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)