FastQCFastQC Report
Tue 10 May 2022
EGAF00003642182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6716
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTACATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCAC280.4169148302561048No Hit
GGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTT280.4169148302561048No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT240.357355568790947No Hit
GGTTTATATAGGTTGCTCTATTTACATCTGAGAGCACAGCTGTCCTGGCA230.3424657534246575No Hit
CACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGA220.3275759380583681No Hit
ATTTACATCTGAGAGCACAGCTGTCCTGGCATCAGGCACAGCAGCTGCAC210.3126861226920786No Hit
GTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGA200.29779630732578916No Hit
CTTTTCATCTGTCCCGCTGCGTGTTTTCCTCTTGATCGGGAACTCCTGCT180.2680166765932102No Hit
GATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTC160.23823704586063135No Hit
GTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCT150.22334723049434188No Hit
CATTATTTCATAGAAAAAGGAATATAGCAAACGGTCAGGGTCAGGGTTGT140.2084574151280524No Hit
GAATATAGCAAACGGTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTTT130.19356759976176297No Hit
AATGCAAAGAGTGCAAATGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGC130.19356759976176297No Hit
CGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAG130.19356759976176297No Hit
CTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCT130.19356759976176297No Hit
GGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTA120.1786777843954735No Hit
TTGCAGATGCAGCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCAGGA120.1786777843954735No Hit
GTACATGGGACCACGCTTTTCATCTGTCCCGCTGCGTGTTTTCCTCTTGA120.1786777843954735No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.1786777843954735No Hit
GAGTGCAAATGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGCTGCCCTGT110.16378796902918405No Hit
CATCTGTCCCGCTGCGTGTTTTCCTCTTGATCGGGAACTCCTGCTTCTCC110.16378796902918405No Hit
GTGCCAAGTGTGCCCAGGGCTGCATCTGCAAAGGGGCGTCGGACAAGTGC110.16378796902918405No Hit
GTATCAACGCAGAGTACATGGGACCACGCTTTTCATCTGTCCCGCTGCGT110.16378796902918405No Hit
CTCTTTGCATTTGCAGGAGCCGGCACAGGCACAGGAGCCAACAGGCGAGC100.14889815366289458No Hit
GCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGC100.14889815366289458No Hit
ATGCAGCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCA100.14889815366289458No Hit
GTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCT100.14889815366289458No Hit
CTATTTGTACTTGGGAGCAGGGCTGTCCCGACATCAGGCGCAGCAGCTGC100.14889815366289458No Hit
CCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCC90.1340083382966051No Hit
GTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTC90.1340083382966051No Hit
GGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCT90.1340083382966051No Hit
CGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCC90.1340083382966051No Hit
GTCCTGGCATCAGGCACAGCAGCTGCACTTGTCTGACGTCCCTTTGCAGA90.1340083382966051No Hit
CTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTG80.11911852293031568No Hit
GGAATATAGCAAACGGTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTT80.11911852293031568No Hit
CACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTCTTCTTGCAGGA80.11911852293031568No Hit
GTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCTGG80.11911852293031568No Hit
CTCTAGTCTCGCCTCGGGTTGCAATGGACCCCAACTGCTCCTGTGCCGCT80.11911852293031568No Hit
ATTTCATAGAAAAAGGAATATAGCAAACGGTCAGGGTCAGGGTTGTACAT80.11911852293031568No Hit
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT80.11911852293031568No Hit
GTATCAACGCAGAGTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAAC80.11911852293031568No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC80.11911852293031568No Hit
CCTGCAAGAAGAGCTGCTGCTCCTGCTGCCCTGTGGGCTGTGCCAAGTGT70.1042287075640262No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG70.1042287075640262No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT70.1042287075640262No Hit
GTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTT70.1042287075640262No Hit
GTCCCGCTGCGTGTTTTCCTCTTGATCGGGAACTCCTGCTTCTCCTTGCC70.1042287075640262No Hit
GCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGCACTCTTTGCATT70.1042287075640262No Hit
GAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCC70.1042287075640262No Hit
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC70.1042287075640262No Hit
TATATAGGTTGCTCTATTTACATCTGAGAGCACAGCTGTCCTGGCATCAG70.1042287075640262No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT70.1042287075640262No Hit
GTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAG70.1042287075640262No Hit
CTCTATTTGTACTTGGGAGCAGGGCTGTCCCGACATCAGGCGCAGCAGCT70.1042287075640262No Hit
CGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCGCCGGTGAC70.1042287075640262No Hit
GACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGAC70.1042287075640262No Hit
TATCAACGCAGAGTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAACC70.1042287075640262No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG70.1042287075640262No Hit
GGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTCTTCTTG70.1042287075640262No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)