FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003642315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCCGTCTGCGCGCTGGTGCTCGACGTGGTCTACACCGATGCCGCCGG28.0No Hit
CGCCAAGCCGGTCGCGAGGCCGACGAAAAATCGCACCACGAGCGTCAATC28.0No Hit
GAAATGACTCAGGATCTGAACCACAGCCTGTGTGGCCAGTGATGCCAGTG28.0No Hit
GCCAGGAGCAAACAGGACTTGTGAAGGAGGCAGTGGATCTCCAGAGCCTG28.0No Hit
GGCCAGCGCCTGGCACTGACTGGCGTCGAGCGCGCCGAAGCGCCCGCGCA28.0No Hit
TTGTAAAGCACTGTGAAGTATTGCACTGTGGGGCTATATACTCTGGATTG28.0No Hit
GAAGAAGGGGCATCTGAAGAACTAAAGAAACAAAATAGGACAGCAAGCAA14.0No Hit
GGACCTCGTGGCCCTGGCGGCGGGCCAGCGTGAAGGCGGCCTCATTGGCC14.0No Hit
AATCTGCAGACATCTCCCCCACCTGGAGGTTAGGGGCCTCAGAGACTTTC14.0No Hit
CATCTGTTCCCTCTGTTGATAGTTTCTTTTGGTATGCCGAAGCTGTTAGT14.0No Hit
GCCTAACCACATCACACCCAGCATCTCACTTGAGACAAATCTGTCGTCTG14.0No Hit
GTCTTTGTTTTCTCAAGGAAACAGGACCAATAGGAAATCTGTCAAGGGGA14.0No Hit
GTAATAGGCCAGTTGGATCTGGTGGACGGTTAGTCCATAGGGAAACCTGT14.0No Hit
GTGCAGGATGTGTTCCTGGAAACGAAAGTGTTCACTGAGTCAGCACTATG14.0No Hit
AGGCAGGAGAGTCACATGATTATGGTGCTGGCCCGAGAAATATGCCATAA14.0No Hit
GGAACGGCCTGGGCGATCGCGCCCGCATCCAGCTGGCGGCGCGGCGCGAG14.0No Hit
GTGGTGCGCACTTGTGGTGGTCCCAGCTACTTGTGAGGGTGAGGCAGGAG14.0No Hit
GAATGGACTCGAACGGAGTGGAATGGAAAGGATTGAAATAGAATGGAATG14.0No Hit
GCCCGCTCCCTCTTTTCAGCCGTTGTGTAGGGCCATTTGGATGCTTTGGC14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)