FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003642316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCCGATCCCGAAGCAATCAGACAGGCTCCCGTGGGCTGCATTGCTCGC28.0No Hit
ATCACGCTCAGCCGCAGCGGCTTGACTGTCTTCATGGACGAGGAAGGGAA28.0No Hit
GCTCTGGAGATCCACTGCCTCCTTCACAAGTCCTGTTTGCTCCTGGCCTG28.0No Hit
GTCTGGCCCCTCAGTGCCCAGAGCTCCATCGACTTCAAAGAGGGTTTTGC28.0No Hit
ATTCCGGCCGCAACGAACTCGCGCTGGCGCTGGCCGGCGTGCAGGGCGCC28.0No Hit
CTCTTTGTATCGTTTCCTTATGGTCAGCAGGTCTATTTCACTTCTGGCAA28.0No Hit
GGAAAGATCCTCTCTCACCAATGTGCGTGGGCATCATCCAATCGGTTTAG14.0No Hit
TTCCATTCCATTCCATTGCATTCCGTTTCCAATGTATTCGAGTCCACTGT14.0No Hit
CTCCAGAGTAGCTGGGATTACAGGCATGTGCCACCGCGCCCAGCTAAGTG14.0No Hit
ACTCTGCCCAGGACGCCTCCGCGGAGGCCCTGCTCGAGCAGTACTCCCAG14.0No Hit
ATCCATGGACGTGGAACCCATGAATATGGACGGCCAACTGTATTATTATT14.0No Hit
CCCAGACACAGAAAGGTGTTTTTTCCTTTGTATCCCACTGGCTTCCTGCC14.0No Hit
GACTAGGAAACACCATTCTGGACACTGGCCTTGTGAAAGAATTTCTGACT14.0No Hit
GCCTACAAGGAGGCCTACCCACCGACCCCATCGGCGTCGCGGGGGCGGGG14.0No Hit
TCAACCAGTCGAGTCACAGCAAGGCTTCAATATGCTCAGACGACAGATTT14.0No Hit
GGATGGGGTTGGTCACCAGAAAAATGAACCATGTGATTAGAAAGTCTCTG14.0No Hit
AGGCCAGCCTACTGGTGACATTGGGCCATATTTCTGAGCCTATGACCCAA14.0No Hit
ACACAGAGCAAAGGCCAGCAGGCTTTTAGTCATTGGTGACCACTTCGGTG14.0No Hit
ATACCTGAAATAAGAAACGGGGAGTGGGAGGAAGCGGCACTTGCTGAGCA14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)