FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003642330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length140
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATTGATTAACGAGGCATCAAGCATTATTGAAATGGAAATCACTGTTGC111.11111111111111No Hit
GGTCGTAGCGGTAGTTCAGGCTGCCTCGGCGGCTGTCGCCGATGGTCACC111.11111111111111No Hit
GGCTTCCTTGACCACGGCGATGCCTCCGTAGACCTCTTCGTTGGTCGGGA111.11111111111111No Hit
GCGTCAGCAGCGCGACTACGCCACGCAGGACTTCCTCGACATCTTCAACC111.11111111111111No Hit
GGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC111.11111111111111Clontech Universal Primer Mix Long (96% over 25bp)
CTGATGTGCTTGCTGACTCAGATGCACTTGTGCTTGCTGATTCTGACGCT111.11111111111111No Hit
GCCTTCGCCGGCTCACGCGCGGCGCGGCTGCTGCGCGGGCGGGCCGTGAT111.11111111111111No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC111.11111111111111Clontech Universal Primer Mix Long (96% over 26bp)
TCGCGGGCTTCAGCCACTAAATCGCGAGCATATTTGCTCAGCGCTTGGTA111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)