FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003642361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGGCGCTCTGTCTGGGGCCAGCCACCTGGCGGGCCGCTCCGGT26.25No Hit
GTAGCTGCCTTCTGCTCTCCAGCGCTCTCAGCACCAAATTCCAAACCAAA26.25No Hit
GTGTGCGGCCAGCACGCCCACCAGCTCCCCAACGCGGTTGTCCAATGGCG26.25No Hit
CCTGGCGGAAGTGCGCGCACACCGTGTCGACGATGTGCAGCTTGGGCAGG13.125No Hit
TCCATGAGGGTCCCGCCGACTGCGTCGCGATCCTCAATGGCTCAGCGACT13.125No Hit
GTATCAACGCAGAGTACATGGGGAGGGAGTGTTTATTTCGCGTCCGCTTC13.125No Hit
GTCCGCCAGCAGTGCGTGGGTGGCAGCAACCCTCGGCAGGGACCGAATCA13.125No Hit
GGAAGCTAGCAATAACCCAGCCCAGAGTGGCTTTCTGCAATGGGGCACCC13.125No Hit
GGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGG13.125No Hit
GTGCCAGGCTGCCCAGCCAGGGGCATGGCCCGGGTGTCCTGGGTAGCAGG13.125No Hit
GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG13.125No Hit
GCTTTAATGAGGGCATTGATCTTATCCTCCGTGACTGTCACCTCATCGTC13.125No Hit
GGTGGAGGCATAGGCCTGGGCCCCGGTCACGTCGCCAACCATCTTCCTGT13.125No Hit
GCGTGAGCCACCACGTCCAGCCTGGGGAAGGTTTTTGTAACTGCTGCTGT13.125No Hit
TTCAAATTCTGCTGCAGAGAGGCGCAGCCCTGACATCGCGACAGGTCCGC13.125No Hit
CTGACTGGGCAATGCCTCATAATCGCGGATGTCCCCTGCGCTGCCCTCAA13.125No Hit
GTGTCCTTGTCGTCCCGCAGGTCCAGCTTGGTGCCCACCAGGATGATGGG13.125No Hit
AGTACCTGGATCCTGAGTACATCGACCGCATTGCCATACCTGATGCCTCT13.125No Hit
TCGTGGAAGAGCTGCGAGACACGTCTGATGACTCCAGGAGTATCGATGCT13.125No Hit
GAGGTTACCCGGCCCGGCCCTTCCTCGCTTCCCTCGACTATTCCACTGCG13.125No Hit
GGAAGGGGTCCCAGCTGGGGCCCCGCAGGAGCGAGAAGGGGACGCGGCGC13.125No Hit
ACCTCCGGGGTGGCGCTGGGGTTGGCTCCATGACCAAGATCTATGGGGGA13.125No Hit
GCTAACTAGTTACGCGACCCCCGAGCGGTCGGCGCCCCCCAACTTCTTAG13.125No Hit
TCCGCGACGTGGTCATAGTCTGTGTCCTGCACAACCTCATGTCGCTAAAT13.125No Hit
GTGGACGACCCGATGAGCCTGCTATACAACATGAACGACTGCTACTCCAA13.125No Hit
AGCTTCATCTTCCGGATCATCCGGGAAAGGGACAGAGGCGGCCGGTTGGT13.125No Hit
ATGGAGGACAGAGGAAAGGGAGATGCAGCCAGTTCAGATCTTCCCGGGAA13.125No Hit
GAGGATGCGCTCCTGGGCTCCTACCCTGTAGATGACGGCTGCCGCATCCA13.125No Hit
ATCAAGCTCCCCGAGGAGTGGACTTGTAAGGACCGCCGCTTTCGCTCGGG13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)