FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003642362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length140
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCGCTCTCCCAGCCGCGCGCCGGCGCCACGGCGGCCAGCAGCAGCAGC26.25No Hit
TCAACGCAGAGTACATGGGCCGCAAGGTGAACCGCTTCCACAAGATCCGG26.25No Hit
GAACTGCGGAGAGGAGTCCTGAGTATGGAGGAGATGTGTCTCATGGAGAA26.25No Hit
GAGGACAGCGAGGGCTCCAGCACTGTCACCGTTGTCCTGCTGCTGCTGCT13.125No Hit
TATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC13.125No Hit
GGCGGTGGCAGCGGTGGCAGCGGTGCCGGCGGCCCCGCGGGCCGGGGGCT13.125No Hit
AGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGAGTCACGGGGTCT13.125No Hit
CGGTTCTTCTTCTTCTGTACCTCGCTCCGGAGATTCTTCAGCAAGGCCAC13.125No Hit
CTCCAGGAGAGCCTTGGACTCCTCAGTGATTTCCACACACTGGTCCTGCT13.125No Hit
ACATGGGAGTGCCTGAGGCAGCTCTGGCTCGGAGAGCCTTTTGCTAGCCC13.125No Hit
CCTTTAGGATTCAGCACCATGGCGGAAGACATGGAGACCAAAATCAAGAA13.125No Hit
GCTGTGTCCCACTCACTCTTTCCCCTGCCGCTCCTGCCGGCAGCTCCAAC13.125No Hit
ACGCAGAGTACATGGGCTTTCCGGACCTGGCCGAGCAGGAGGCGCCATCA13.125No Hit
ACCCACTGCGGATATGGCTGTCTTGGCTGGATCCCTGTTGGGCCCCACGA13.125No Hit
TCTTGGTTCCCTTGAGCACGAGCTTGGTAGACTTCACATAGGAGTACTCG13.125No Hit
GGAGCTGGCCTGGGCCTTCTCCTCGGCCAGGCGCTGGGCGGCCTCGGCCT13.125No Hit
TCACTCAACACTTCCTTCCCCAAAGCCAGAAGATGCACAAGGAGGAACAT13.125No Hit
GGCGGAGGCCGAAGGTCTGTGGGGCAGGACAGGAGTTCCTCGTGCCGTCG13.125No Hit
GCAGAGTACATGGGGAAAACACCGCCTGCTAAAAATACCCGACTGGAGGA13.125No Hit
CTTCCCCAGCCTGGCGCCTCGTTACAGGGAGTCCAACACCGCCGGCAACG13.125No Hit
GAGCTAGGATGGAGAGTCCTTGAACCTGAACTTACACAAATTTGCCTGTT13.125No Hit
CTATTCAGCCAATGTGATGGTGGACAGCAAGCCAGTGAACCTGGGGCTGT13.125No Hit
GTCCGGAGCTGCGGCCTTAGGCTTCGCTTCCTACGGGGCGCACGGCGCCC13.125No Hit
ATGCACTTCCCCCCAACGTCCTTCGACAGTGCCCTCCGCCACAGACTTTG13.125No Hit
CGACCGCGGGAGTGTGCGGCGGCGGGGCGGGGACCCCGGAGCAGGTCTTA13.125No Hit
TTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTG13.125No Hit
AGCATGGTTTGTTCTAATGCTTCTTGTTGGCAGCTGCCACCTGTCCGGCG13.125No Hit
GATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG13.125No Hit
ACGCAGAGTACATGGGCCTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCT13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)