FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003642623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTTGCATTGAGGAAACTCCCCTTTGGCAGTTGACCACGATGCAGCGGT412.5No Hit
CTCGCGGACGGCGCGTTCCAGGCGTTCAGTCTGGCCTACACGCAGCGGGT26.25No Hit
GTCCATCGACACGATCGTCGGGCACGTCGTCGCACAGATTCAGCAACAGA26.25No Hit
GGCTGGGACCGTGTTTATAGCGGTGGTCTACCGCGGGGCCCCGGTCGTTA26.25No Hit
GTTCTCCCGCCGTGCCAAGGACCTGGAGACACACGGCCGGGTTCATCTGG26.25No Hit
GTATAGACCGGTCCCATCGCCCAGAGATGGAAGTGTCGCAGCGTCCCTCA13.125No Hit
CTTGTCCGAGATGCGTTTCCGGGATGGTTTGGGAGCGCGCATGAGTGGCA13.125No Hit
GCCGAAGCCAACGCGGCTTGTGTCTCATCGGCGGTGCGGCCGGGAAACAT13.125No Hit
AGGCACGAGTGGCGGAGGCCTGGTGTCGAACCTCTTGTTGCTGGTGAACT13.125No Hit
GCGCGCAACCGGAACCCAAACCCAAGCCAGCCTAGACACCGTCGTGAGCC13.125No Hit
AGGTGATCCCGGCCCGCTCGAAGAGCTCCTTGTTGTACCAGAAGCCGACC13.125No Hit
ATGCAAGGAGAAGACCTGCTCAGGGCACTTGGAGAATTGGCAGGGGCTCC13.125No Hit
GGGAACCGGCAGCAGCAGCAGTCGAGGCGATGCGCCCTTGAGAGCCGGCC13.125No Hit
TTATGCGCTCGTGCGCAAGGTAGAAACAGCCACCTCTAGCTCTCAAGTAG13.125No Hit
CACGATCGCGACCCGCTCGGCCAGCAGCCGGCGGGCCACGAACGTCAGGA13.125No Hit
CACCGGCACGGGTCGAGACGTGCGGACGCAGGTGCAGTATGCGGTGGAGC13.125No Hit
GGTCAGCGCTGTAGCACAGTAGGTTAATCCTCTGCCTGTGGTGCCGGCAT13.125No Hit
GCTTGCCAGTGTCGTGACGGCGGTGCGTTGGAACTCGTCGAGCCCAGTCC13.125No Hit
GCCCATCGGAGCACTTTTGGCGGCTTCCACCAACGCATCGCAGACCTGGT13.125No Hit
TCTTTGCATTGAGGAAACTCCCCTTTGGCAGTTGACCACGATGCATCGGT13.125No Hit
CGATCGAGTTCATCGAGCGCGTGCGCGGTGACTCCAAGATGAGCGGCCAG13.125No Hit
CGTGCGGACGACGAGGTCATGACGATCTCCTAGGACGGGGCTGCGGGTGG13.125No Hit
GTTTCGCAGGGCGCGCCGTCGCTGCGCCACGCAAGCGTGAATTGCGGTTC13.125No Hit
GGGTGGTCCGACGGCTCGCGCGATGGCCGCGCTGGGCACCGACGGTGCGG13.125No Hit
CATCGGCCTTTTGAAAGTTCTTAACCCGCTTCGCTTCCTGCCGATCCAGC13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)