FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003642624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGTATCTTCGCGCATCGCATGCCACAGAGCACCTTCTCCTCTCGTTCAT412.5No Hit
GTCCGGTGCTCCGGAGTCGATGCCGGACGACCTGACCACGACAGTGCCCA26.25No Hit
GCCACCCACCAGCCGCCGCGCCCGTCCCAGATGCACGGTCCAGTCGACCC26.25No Hit
TGCTTGAGGTGCGCGTCCTCAGCCTTCCGAACCGAGAACAACCTCACATC26.25No Hit
CCCAGATGATCGTTTTTGGCGTAAGCGACGACCTCCTCGCTCGCCTCCAA26.25No Hit
GTCTTCCATCCACTGGTTCACTCCCCAAATGGCCGCAACAGCCAGAGCTG13.125No Hit
TTATTGCTCCTTGTCATCCTTGTTGGTGGGGTGTTCACTCTCGTCGGAGC13.125No Hit
CAAGAAGAAGCTGACCACGGTCACGCAGGCGGGCAACCCGCCCTCCCTGT13.125No Hit
CACCAGCTGTGCGCCCCACTCCTCGATCACCTCGACCGGCTGCCGTTGCC13.125No Hit
CCTCGGGGGACAACATGGCCGATGTCGGGGGGACGCTGGCGAGGCGGTCG13.125No Hit
CTTTAGCAAGTCCGCCAAGCTGCGCGGCGGCGAGATGGGGCAGGCGATGA13.125No Hit
GCTCCAGCTCTCCTTTCGTCCTGCCCCAAAACCGACCCAGCTGGGCTCCC13.125No Hit
ATGATGGGCCGAATCTTGTAGAGGGACTCCGGGCGTTCACTGAGAAGAGA13.125No Hit
GAAGAAGGAGAGGACGCGAAAAGAGGAGGATGCGCAGCCGGGTTTGTTCG13.125No Hit
ACTTGACACTGAGCGTGTAAAGCGTCCCCGAATGACCTCAATCTCTGCCA13.125No Hit
GAGAACCCGCTGCTAATTTGCGGCCACAGCGATTTCACGGCGCTGCAGAT13.125No Hit
GACCCTGGAAGGTTCGCTGCGCTTGCAGATACTCCAGCAGCTGCTCCTCG13.125No Hit
TTCCTGCTCTTTTGCTTGACGATGCGCTTTCCTGGACCTACAAGCCCGTT13.125No Hit
CCAATACTCCGCCCACGGACACACCGTACCCGGACGCGGAAATGCAACGA13.125No Hit
GTGCCAGCACGGGGCGCAGCCACCGGCGCCGGCGACGCGGGCCGGTGCGG13.125No Hit
ATCATGCGCAGCGCCGCCGACACTCTGGCGCGGCTGACCCTGGAGCTGGG13.125No Hit
GTCCAGGCCGGCTACAGCAAGGGCATGGTCGAGACGCTGAAGAATGGCGG13.125No Hit
GGGTCAGCAGCGCCACGACCAGCAGCAGCGTCAACGCCGCGTTGAGCCGG13.125No Hit
NCGTATCTTCGCGCATCGCATGCCACAGAGCACCTTCTCCTCTCGTTCAT13.125No Hit
CAGCTGGTGCAGGCCACTGTGCGGGAGCTCCATCTCCGACTCCACGCCCA13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)