FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003642787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTTGTTGTGGCTAGCCGGCCCTGGTGTGCATGGTTGGTCCACATACTT313.043478260869565No Hit
CCGCCGACATTCCCGACAGCGAATGGACGCGATTCGTGTGCGTCGAAACT28.695652173913043No Hit
CGGCGAGGCTCCTCTACGAGCGCGCGGCGGCGGCCGGAGAAGCGCGGGCG28.695652173913043No Hit
TTGGCTGCCTACGCCGCTCGGCGCGCCAGCGGTCCCTAAAGCGGCGCCCA28.695652173913043No Hit
CCAGGGGGCCGTCATCGAGCAGCACCAGCCCGTCGCGCAGCAGCGCTTCC14.3478260869565215No Hit
ACCGATGCTTTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCTA14.3478260869565215No Hit
ATCCCGGTTCGCTCGCAGCGCAATCGCCTGTGGTACGCCTAACGCGGGGC14.3478260869565215No Hit
CCAATGCATATCTAGTAGGAAGAGTCGTATATCAAATAAAGCGTAATGAA14.3478260869565215No Hit
AAATAGGATAACGGCTCAAATAATCAGCCATCCATTCGCTTTGATTCAAA14.3478260869565215No Hit
TCTACGGACAATCCCTAGGTTCGGGCATGGCACGGGCGTTGCCGATGTCG14.3478260869565215No Hit
AAAGAAGAATGGCGAACTACTTGTCCTTTCTGATATAGGGAATCGCTTTT14.3478260869565215No Hit
TCCATCAGCTATGCGGTCGATCTCTTTGGTGGCAATCGGCGTGCCGTGGA14.3478260869565215No Hit
GCCCGCGACGCCTACCGCGTGACGGAAGACACCAGCAAGAAGAAGTTCTA14.3478260869565215No Hit
ACCTTGGACATGGCCTCCATTCATCCCGTGAATGTCGAGCATCGCGGCAT14.3478260869565215No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTACGAGCACAATCTCGTAT14.3478260869565215No Hit
GTGAAGGTGAAGGGCGACAAGGTCATCTTCGACTTCGTGGGCAAGGCAGG14.3478260869565215No Hit
AAGCTGTACTTCGAGCGCCACGACGGCCATGCCGTGACCTGCGACGACTT14.3478260869565215No Hit
CAATAGCAAGCGCCATTTTTTTGCTATAGCTAGTATCTTCGCGTTGGGTT14.3478260869565215No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)