FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003642788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACCACACCACCAGATTATGTAACCATGCCACGTGGGAGGCATGGCTAG313.043478260869565No Hit
CCTGCGCACTGGATCGGCTCAGGCGGCCGGCCGCGTCAGGGCCTGCCCTC28.695652173913043No Hit
GATCGCGTGTTCGAGCTCCTCATGGGCTCCGAAGTCGCCCCTCGCAAGCA28.695652173913043No Hit
GGAAGCTAGGCACGCGATGGAGCGCGGCTGCGACGGCGGATCGGGCCCGT28.695652173913043No Hit
CACTAGAAGAAGGCATTTTCCCCAGCCAATACGCCATAGACAATCACAAT14.3478260869565215No Hit
TCGCTGCATCGTAGGCTGCCGTCTGGGAGTTTGTCTTTTGTGCCACGCCC14.3478260869565215No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14.3478260869565215No Hit
GCGTGCGTCGCCGTCGTACTGGCCAACGGCCTTCACGCGCGGCGTGCCTG14.3478260869565215No Hit
GGCGATGGCGAGCGCCACTGGCTGGAAGCGCTGCTGCGCGACGGGCTGGT14.3478260869565215No Hit
GGCCGAAGGCGTCCCAGCCCATGGGCATCAAGACGTTGTAGCCGTTCATG14.3478260869565215No Hit
GCCCGACTTGTCCGCCAGCGTGTCATACAACCGCATGGCGGTCGCGTTGG14.3478260869565215No Hit
CACTTACTCAAGATTTCTCAAAACTCCCAACAAGCTTTGCTACTGTTGCA14.3478260869565215No Hit
CGCTACGACACCGCGGCGCTGGGGGACATCGCCCAGGCCGTGAAGCGGTT14.3478260869565215No Hit
GTTTAAACATAGCTGTTATAGTAAAACCAACCCTCGCGTACAAAACTTAT14.3478260869565215No Hit
TGCTGGTATTGCTGATCGGCACTGAGCACCTGCAGATAGCCGGCCACGCC14.3478260869565215No Hit
GTCCGGAGCGACGCCCGCCCGCGCGAGGGCGCAGGCGCAGAGGAGGGTCC14.3478260869565215No Hit
ATCTTGATCTTAGGAAAATTCGCTTACCTGTTTCAGCTATTACTTCCATC14.3478260869565215No Hit
GAAAGCATCGGTCTGTCTCTTATACACATCTGACGCTGCCGACGATACTC14.3478260869565215No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)