FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003642956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATATTGCAAATGGTTTGCAAGTGCATAATCCGCTAGTGATGCAGCGC53.3112582781456954No Hit
GGATGAGGAGACGCCTCCCCCGCAGGTCCTGCTGCACTCTCCCCATAGTG21.3245033112582782No Hit
GAATAATCTACCCTGACTAAAGCTTGAAATGCTACATTTCCAAGGTGAAG21.3245033112582782No Hit
GTACTTCTGGTTCCTTCTGATGATGGGCGTGCTTTTCTGCTGCGGAGCCG21.3245033112582782No Hit
AAGAATGCATGATCTCAGCGTGATTAAAAAAAAATCAGTGGAAATAAATG21.3245033112582782No Hit
ATCTCACTGCTGGATAAACAAACCTTTAAAGGAACTGAGAGACTTGCTCA21.3245033112582782No Hit
TCTTCACGGGAGGCGGGCAGAGGACTGCTCGGATCGCTTCGTCAAACACT21.3245033112582782No Hit
GATTTAGAGTCAGTGACATCCTGACTGGATTGGTTCTGCTCTCGCTGGGC21.3245033112582782No Hit
AGTGAAGACCAGTGAAGAAAATCAAAAGCGGCAGCACGGGTAAAATCCTA21.3245033112582782No Hit
GGATTTTTTTTTTCCATTTTAATTGGTTTTCCTGTGTTATCTAAACATAA21.3245033112582782No Hit
CCCAAGTAGCTGGGATTACAGGCACCCACCACCATGCTCAGCTTATTTTT21.3245033112582782No Hit
GACTTCTGAATAAACCATGACATAAGTCCCAAGATGACCTGACAGGCCCT21.3245033112582782No Hit
CCGGAACCGTAAACGGCATATCTCAGAGGCCCACCGACATCCAGACTTCT21.3245033112582782No Hit
GAAAAGCTCCGACGAAACCATCGCGAAAGTTGTCGCCTGGGCGAGCAAGA21.3245033112582782No Hit
GATTTTAGATACAACAATATTTATAGCGATCGCCTTTACTGGTGTTGTAC21.3245033112582782No Hit
ACTTGTAGCTGTAAACCACGAACCTGGGCTGTCTCTCCGGCAACTCCATT21.3245033112582782No Hit
CATCACGACTGGGGTCTCGAAGAGGACGGGGGTAGGAAATCCTCCAGGAT21.3245033112582782No Hit
GTGCCCCCGGCGGCCCCTCACCACCATCACCACCATTCGCACTCGGGGCC21.3245033112582782No Hit
CTCCTGGGCACGATCCAACTCTTCCTCAACCAGCTGGATGCGTCTGTTCA21.3245033112582782No Hit
AGCATCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACC21.3245033112582782No Hit
CCCTGCAGGAGCTTAGAGGCACAGCCTCCTTGGTAACCGGCAGCCTTCCG21.3245033112582782No Hit
CTTTACATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCAC21.3245033112582782No Hit
GTGCAGGGACCCCATCATCCTGAGGCAGCCAGTGCTAACACCTCCTAAGC21.3245033112582782No Hit
ACTGAGATCAAGGTATTCATGATTGCCGGCGAGGAAGCCCTCGTCTTCCG10.6622516556291391No Hit
GCAGGACTCTTCTCGTTGTTCTCCAGGTAGGTTCCTCCCCGTGGAACTTT10.6622516556291391No Hit
ATGCTGAGCTTTATCATATCATCAGCAGCAACCTGGAGAAAATTGTCAAC10.6622516556291391No Hit
TTGTAGGGGGCTCCTCGTCCATAAAACTCCTTTCCGGAGGTGACATCAAA10.6622516556291391No Hit
ACACTCTACAGTGCTGTTAGACCTTTTGGCTGCAGTTTCATGTTAGGGTC10.6622516556291391No Hit
CCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCGCTTGAGCT10.6622516556291391No Hit
CCTACATGACATGTTTTTCTTAAAAACAATGCCTCCACTCCAAATAAATC10.6622516556291391No Hit
GTATCAAGCTCTGTCCTCAGGGAGCTCGCTCCTATGTTGGAAGGGAGACA10.6622516556291391No Hit
GAACCCCACTAAGATACTCCATGAGAAGATCAACCCCAAGACACATAATC10.6622516556291391No Hit
GAACGAGAGAAGGCAAACTTCAAATTGAGCTGGCTCAGCTGCAATATGCA10.6622516556291391No Hit
CCTCCACCCTTTTTGCTACCAATTCTTCTACTCTTCGTGCTGTTTCTTCC10.6622516556291391No Hit
GGCGCGCGGAGGGGAAATGGTTGCCGAAAACAAGCCGGAAGATGATCATG10.6622516556291391No Hit
ATGCTAGAGGGAAGAATTCTTAGTAACTTCTTTGTGTCTGTCTCTTATAC10.6622516556291391No Hit
GTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGCTCTGAACCCTGAGTC10.6622516556291391No Hit
GAACAATCATGTCTGACTCCCTGGTGGTGTGCGAGGTAGACCCAGAGCTA10.6622516556291391No Hit
GTTTGTTGGGTGAACTTTGAGGCGCTGATCATCACCATGTCGGTAGTCGG10.6622516556291391No Hit
CATTTCTTCCTTTTCCAACACATGTTCAGCTATCTCAAGAAGCTTTCTTC10.6622516556291391No Hit
CCTTCCAGTCGGGCACGTCCTTCATGATGATGGCCTCCTCCTCCAGGTTC10.6622516556291391No Hit
GAATTAAATCCGCTTCTTTCACTTCCTCAAGCGTTGAGCGGAATGCAGCA10.6622516556291391No Hit
GTTAGAAAATAGAGTCATGTGTGTTCATAGTATATAGGTCGGAGAGGCAG10.6622516556291391No Hit
CTCCTTGAGCGTCTCCTGTCTCTACTTCGAGATCTTCTTCGCTCTCGGCT10.6622516556291391No Hit
TTACGATGCTGTAGCAGCCGGGCGCCGTAGCTCTCGCCTGTAATCCCATC10.6622516556291391No Hit
CTACAAGAAAGTTTGCCTATCTGGGGCGCCTGGCTCACGAGGTTGGCTGG10.6622516556291391No Hit
CTGCAGCGTCGTCCTCAAATTTCGCACTGACCATAATGTGATCCCTTCCG10.6622516556291391No Hit
AACGCAGAGTACATGGGGCAAGAGCCTAGTGCGGTGGTGGGAGAGGTATC10.6622516556291391No Hit
CAGCTAATTTGAAGCACACATTTGGGTTCTGGACTATGGTTATGCCAGCT10.6622516556291391No Hit
GTGTAGGGCGGTGATACCCAGCTCCTTGCACCTCTGGGCCACATCCTGGG10.6622516556291391No Hit
CCTCGCCGAACATGCCGGCGATGTCGTCGCGGGTGGCGGAGGTGTCCTCG10.6622516556291391No Hit
ACCCAGCGAGTGGGAGCTCAATTTTAAGGAGAGAGGTTTAGGTCTGAGAA10.6622516556291391No Hit
GTGCTGGCGATGGCGCTCCTGGCGCCGTGGGCCGTGCCTGCCCAGGCCCT10.6622516556291391No Hit
GATTAGGGAAATGTAGGATTGTTCGATAGGACTAATAGCCTGTTGAAGTT10.6622516556291391No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA10.6622516556291391No Hit
GTACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAA10.6622516556291391No Hit
TCTTTGACCTGTGATTGCTTCTTTTCACTTCTTTCACACCTTTCTTGCTC10.6622516556291391No Hit
TGCCAATACCCTGGGCAATGACGTCTTCAATGTTTTTTCCATTCAGCTCA10.6622516556291391No Hit
ACTTGGGAGGCTGAAGCAGAAGAATCGTTTGAGCCTGGGAGGTGGAGGCT10.6622516556291391No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACACATGTGACGCGG10.6622516556291391No Hit
CGCACGGCCAGGGCATGGAGACCAGCTTCGCGCAGATCGCCAACGACGTG10.6622516556291391No Hit
TTGGAATCCATCGCGCGTTCTTCGACGCGCTGGTTGTCGCGGAAGGTCCC10.6622516556291391No Hit
GCTTTATAAGTTGCGGTGGATTTTTTGTTTTTGTTTTTGTTTGTTTGTTT10.6622516556291391No Hit
ACCTTCATCCCATGCTCCTTGGTGGGCACCTGTCCGTACGGGCAACCAGT10.6622516556291391No Hit
GTCTTAGACTTCCAGCCTCCAGAACTGTGAGAAATACATTTCTGTGGTTT10.6622516556291391No Hit
GGTCACGACCAGGTCCTCAGCGATAGTTTGCTCCTGTTGCTCGTCCTCGC10.6622516556291391No Hit
GCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCC10.6622516556291391No Hit
GCTTCATGACAAGCCACAGCTCATCTTTTACCACAAAAGATGTGTAGTAA10.6622516556291391No Hit
ATTTAATTCAGCAAGGACAGTTTCTCTTGCTGTTGACGTGTGGATCAACT10.6622516556291391No Hit
GGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGG10.6622516556291391No Hit
CCGTCGCATAGCGGGCGGTGCGCTCGCCGCGAACTTCGTGGTCGGCCATC10.6622516556291391No Hit
AATGCAAAGAGTGCAAATGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGC10.6622516556291391No Hit
GCCTGAGCGAGAGCCGACGGCGGGCGGGCGCAGCTGCTGCCGGAGCGCCG10.6622516556291391No Hit
GCGCCATGCTCTCGCTCATCGGCGCGCCGTGGTGGCGCATGAGGCTGGAG10.6622516556291391No Hit
GCTGACAGGTGGAAGGAAGGAGAGAGAGTTCTGTGGATTGCTGAGGCCTT10.6622516556291391No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA10.6622516556291391No Hit
CTACAACACTGCTCTTTGGTGCTGAAGGCTAGAACTGGCAAGGGGCTTGA10.6622516556291391No Hit
CTTTCATGCCTCTCTCACTCTCATCTGCTGCCTTCTCAGCTTCCTCCAGC10.6622516556291391No Hit
TTCTTTACCATTTCCCAGGAGCTGGCTTCCGAACCTGCCTTTTAGAGAAA10.6622516556291391No Hit
GAATCAACTTAAGTGTCCATCGATGAATGGAGGATTGGATAAAGAAAATG10.6622516556291391No Hit
ATAATAAGAAGACCATCGCAGAGGGAAGGCGAATCCCCATAAGTAAGGCT10.6622516556291391No Hit
CAACTGGTCTCAGCTCAGCCTTATGCCTTTCCACTGACACCCCCCACCCC10.6622516556291391No Hit
TTTCATATGATGCTTCTATTTGATTCCATTCGATGATGATTTCATCTCAT10.6622516556291391No Hit
GAAAGACATAAAGAAAAGCGACACAAAGAAGGTTTTCATTTTGATGATGA10.6622516556291391No Hit
CGTCAGATGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAATGTGG10.6622516556291391No Hit
GTGCGAGGTAGACCCAGAGCTAACAGAAAAGCTGAGGAAATTCCGCTTCC10.6622516556291391No Hit
ATACAGTAGGATTTATTCAGGATCTTCCGACGACATTGATTGCTGCATTC10.6622516556291391No Hit
GGGATTACAAGTGTGCACCACCATGCCTGGCTAATTTTTCTATTTTTAGT10.6622516556291391No Hit
GGTATCGACATCGTCATCCTCATCATCTTCAGCTGCCCGCTTGCCCGTAG10.6622516556291391No Hit
GAAGTAAAAAGACCAAGCAATAGAATATACAGGACAGGAAAAGTCCATTC10.6622516556291391No Hit
AAGGGAAGCCCAGGCAAACTCCTCCTCCATCCAGCAGTACCAATCCTGCA10.6622516556291391No Hit
GAACAGCACAATCCGCCCTGGCTGTGATGTGAATCCCTCCTGCGCACTGT10.6622516556291391No Hit
ACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCG10.6622516556291391No Hit
GCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCTC10.6622516556291391No Hit
CACTACCCGAATAGTCGTCTGATGACCCGGCGACACCGCCGGCGACCGTG10.6622516556291391No Hit
CCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGCAC10.6622516556291391No Hit
AGCTAGCATCTCTGACGAAAACAGCAGACGGAAAAGTACTGACCAGCGTC10.6622516556291391No Hit
TCTCCATCCTCTTCCTCACCATCACCTTCTTCTTCCTCCTCCTCTTCCTC10.6622516556291391No Hit
GTAATATACATAAAGCAAAATATTTTGGCATCACCTAGTGAAAACAGACG10.6622516556291391No Hit
GAATATGTATGTGCAGGCAGACACTGAACATCAAAATAGGGGAAGTCTAT10.6622516556291391No Hit
TCCTTCTTGCAGCAGTAGTACGTTAGCTCATTTTCCCTCAAGCGGGTTGT10.6622516556291391No Hit
TTACTGCTACTTCTAAATGCAAATTTATAATATTTGTGTATTATCAGGCA10.6622516556291391No Hit
CCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGGATTGCTTGAGTT10.6622516556291391No Hit
GATGAGGAGATCAGCTTCAAGCTCTTCCACGAGTGCCTTCAGCTCTTCTA10.6622516556291391No Hit
TATACCAACAGTTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.6622516556291391No Hit
GTCCAACCAATTCCCCTTCGTTCAATTCAAGAGTCACATCTCCAACAGCT10.6622516556291391No Hit
NTCTGAAGTAGCTCATCTTTTTCGTCAGTGTTAGCCACACTTGCTTTCAA10.6622516556291391No Hit
CATCTTGACTCAGAGTGCTTTTAGTGCTGCTTCCTCCTGAAGGAACATCC10.6622516556291391No Hit
ATCCTGGAAGGAGCAGAATTGGTGACAAGAGATTTTGAGGGAAGTGTGTG10.6622516556291391No Hit
TTACACTACATTCCCTTCCATTCCAATGAATTCCATTCCATTCCAATCCA10.6622516556291391No Hit
TGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTG10.6622516556291391No Hit
GTTTCTTCCTCGATGAGTTTTTCTTCTATTTCTTGCTGTCGAATTTTTCG10.6622516556291391No Hit
GTGTTGTAGATAATTTCCATCTAAAATTTTACTTGTCAAGATATAGAATT10.6622516556291391No Hit
GACCTCTGCAGCATAGAACCGTGAACGAGGCTCGTCGAATTTTCGGGAGC10.6622516556291391No Hit
GTACTGGAGGTTGCGCCTCGGTGGCGCCGCGCTGCTCCTGCTGCTCATCC10.6622516556291391No Hit
ATTGAGCTCTGCACGCTGGGGAGTTTGTTGGGTGAACTTTGAGGCGCTGA10.6622516556291391No Hit
ATTAAAGGTGTTAAATCTCCTTGGTGTGATGTTTTTTGACATAGATGATG10.6622516556291391No Hit
GAGTAAGTGGAAAAGAAAGATGCGTGCTGAAAAGAGAAAAAAGAATGCCC10.6622516556291391No Hit
ACTAACAGAGTTGAACCTTTGTTTTGATACAGCATTTTGGAAACACTCCT10.6622516556291391No Hit
GTGCAAGCAGAGAGATGGAAATTTTTAGAAAGAATCAAAACGAAACACTA10.6622516556291391No Hit
CCCAGATCTGTGCAAAAGCAGTGAGAGATGCACTGAAGACAGAATTCAAA10.6622516556291391No Hit
GCTTTCTCCTAACTCATACTTTGAGTCATCCTTGACTTCTCTCCTTTCTT10.6622516556291391No Hit
ATTCTTGTGTTTCAGCCTCCCAAGTAGCTGGGACTAAAGACATGAGCCAC10.6622516556291391No Hit
CATTTATATCAAAATTTCCTGCCTCTTCATGAGAGAGGCTTGCCTTTCAC10.6622516556291391No Hit
TGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGA10.6622516556291391No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)