FastQCFastQC Report
Tue 10 May 2022
EGAF00003642963

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642963
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24213
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG540.22302069136414324No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG500.20650064015198447No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT440.18172056333374634No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA440.18172056333374634No Hit
CTCTAGGCCACGGAATTAACCCGAGCAGGCATGGAGGCCTCTGCTCTCAC370.1528104737124685No Hit
GGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTA360.14868046090942882No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC330.13629042250030976No Hit
GTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTC320.13216040969727005No Hit
CGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCT310.12803039689423037No Hit
GCTTAAGACGGTGAGGTCAGCTTCACATTCTCAGGAACTCTCCTTCTTTG300.12390038409119067No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT290.11977037128815099No Hit
GCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGC280.11564035848511131No Hit
GTCTCTGACAGTATCGCGGGCGTTTGCAGCTCCCAGTGCCTCGTGCTGTT260.10738033287903193No Hit
AATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGCATT250.10325032007599223No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG250.10325032007599223No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG250.10325032007599223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)