FastQCFastQC Report
Tue 10 May 2022
EGAF00003642978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003642978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6749
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTC110.16298710920136317No Hit
CTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCT90.13335308934656986No Hit
CCCCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTCAGCCCTTGAGGGC80.1185360794191732No Hit
GTACAATTACCCACCACTGGATTTGACTCAGAGAGGACCCCCAGAGGGTG80.1185360794191732No Hit
TCCTTGTTCCGGTCCAAGTCTTCCATCAGCCTTGCAATTTCAGCATCCTG70.10371906949177656No Hit
GGCCATTGGCCTCCTCGTGGCCATCTTCCACAAGTACTCCGGCAGGGAGG70.10371906949177656No Hit
GCCATGGCATGCCCCCTGGATCAGGCCATTGGCCTCCTCGTGGCCATCTT70.10371906949177656No Hit
GTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGA70.10371906949177656No Hit
GCCCTCAGCCATGGCATGCCCCCTGGATCAGGCCATTGGCCTCCTCGTGG70.10371906949177656No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)