FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003643137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length140
%GC64

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGAGGAACGGGTCAAGCACACCTTCATCAACGACAAGTCGATGGTGT310.344827586206897No Hit
CAAAGATTCACATGACCATACTTGTGTCTGTTGCGCGCCGGGCCTCGGCT26.896551724137931No Hit
GTGCATCCGCCGCGCGAAGACGGCGAGCGCCTCCTCGCAGTCGGCGCACT26.896551724137931No Hit
CAACAACGCCTACGCAACAAGCTGGTTCTTATTTCATGGTGGCGGTCGTC26.896551724137931No Hit
ACTCGACGCCCTCGCGGATGCGGTAGGCGGTGCGCGCGTGCCGCTCCGGC26.896551724137931No Hit
GTCCGACGAGACGCCCGGTCCCGGAGGTCGACCCCGAGGTGCGCATGACG26.896551724137931No Hit
AAGCACATCAGGGTCGAGAGACCCGCGGTGAGCAGTGAGAGCCCGAGCGC13.4482758620689653No Hit
GCCGTAGGAGACGCGCAGCTGATCGTAGTCCTGGACCTCGATGTCGTCCT13.4482758620689653No Hit
GTTGTGGCTGCGGCAGCCAAACCGTTGGCATAGGCAACCTGGTGGTCAGA13.4482758620689653No Hit
CTCAGGGAGTTGAGGTCACCCTGCCGGCTCTGGGCGAGTCCGTCACCGAA13.4482758620689653No Hit
CGCTTTTTCCCCTCGCTTTTCAGAGCTGCATCCTCGTGTTCTAACTTTCC13.4482758620689653No Hit
ACACTCGAGGGGGCCAACACCTCGTTGCAGTACCACCTGCGGGTGCGGCC13.4482758620689653No Hit
GTTGGCGAGATCGAGGCCACGCTCAACAAGTGGCTGTCACAGCGTCACGG13.4482758620689653No Hit
ACCCGCAGCTGCGCGCGGCGGTGGCGTGGTACGGTCGGCTGGAAGGCGAG13.4482758620689653No Hit
GGCCATGGCGACGGTGAGATTGTTGGGGTTGGTGATGGGCGGAGTAGCCC13.4482758620689653No Hit
TCCTCTTTGAGGCGCAGGTGCAGTGCCGGATTACAAACGCGACGACCCTC13.4482758620689653No Hit
GACCTACGTGGGGCTCATGTCCTTCATCAACAATGAAGCCAAGCTGGGCT13.4482758620689653No Hit
GGTGGAGGACGAGCCCCGGCTGGACACCGGGATGGAGGCGGCCCTGCTGC13.4482758620689653No Hit
GCCGGCGGCCTGTGGCGGGTTCTGGCGCGGTGTCAATGTCCCCTCGGAGG13.4482758620689653No Hit
GATGTAGATTTTTGGCTCCCTCAGGACCAGCGTTGCGGCCGGCAATTTTC13.4482758620689653No Hit
GTGTTGCTACGTGCGGCCGTCCTGGCGCGTCGGTCCATCGTCATCGCCGG13.4482758620689653No Hit
CGAACGAGGCGCGCACGATCAGCCAGTAGCTCGGCGGCCGCACGTCCCGG13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)