FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003643138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length140
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCAGTAAGTGCGTTTCGCGAGCGCAATCGGCTGGGTATCGGGGTGCAAC310.344827586206897No Hit
CTGGAGGACCTCTGGGCCTTCAACGACGAGCGCGTCGCACGCGCGGTGGT26.896551724137931No Hit
TCGTATACGTCCAGCTACCAAGCGTACCGTCGCTGTTAACCGGTGCGTAT26.896551724137931No Hit
GGCCGGAGCGGCACGCGCGCACCGCCTACCGCATCCGCGAGGGCGTCGAG26.896551724137931No Hit
CTATTACTTCTGAGGCCGTCGTGGGATCCGAGCTGACATCGCGGGTGCGG26.896551724137931No Hit
CTCCCCGGCCACGTCAGGCCCAGCATCAAGGAATTCCCGAGCCATCCGGG26.896551724137931No Hit
ATGCCGAGATGCGCGCCCAGGACTATGTCACCTTGGTTGGCAAAGGTTTG13.4482758620689653No Hit
GGGTTGACCTTGGCCGATAAGTACCTCGGGGCGGTTCCCGCTGCCACCGG13.4482758620689653No Hit
AGCTGGGACGGTAGTCGGCGTGGAAGGCGTGCGGCGCGTCCGGGTAGATG13.4482758620689653No Hit
GATGACTGGTCTGTTCGCCACCCACAACCTGGTTCCCCCCCACGCCGGGC13.4482758620689653No Hit
GGCCTGGAAGGCGACCATATTGTCGCGATCTGGATTGAGGTGAGTGAGCA13.4482758620689653No Hit
GACGATCATCGAAGTGTCCGGGCCGAGCGCCCGCGAAGTGCTGAACAAGG13.4482758620689653No Hit
GGCGCCTCGCTGAGAAGCGTCAGGGCGCGATAGTCGGTCAGTCCCAGTCC13.4482758620689653No Hit
GCGAGCACGGGCGCCGTCACGAGCTGGCAGGCGTTGTACAGGCGTGCGAA13.4482758620689653No Hit
GCGCACCGGAGGTGGAGCGGACTCGCGGGCCGATGCTCCGGTCGAAGCCG13.4482758620689653No Hit
CCGATGATGGCTAGGACGGCGCCGACTTCGGCGTCTTCGTCTTCGGGGAC13.4482758620689653No Hit
ATACCGGTACGTTCTCGACGGAATGCTGGAGGCCGGCAATATCACCCAGG13.4482758620689653No Hit
GTATGCAACAGTCTACACAGCACAAGTGGGTGGACATTGTGCTCGGCATG13.4482758620689653No Hit
AGCTCGTCCTGTCCGATGAGGGCCAGGCCGCGCTCGCGGACGCCGGGTTC13.4482758620689653No Hit
CCTCCTAGACGATGCCCGGGATCAGGACCGGTCAACCAGATCGATGTCAA13.4482758620689653No Hit
CGCACAGCGAGTTGCGGAATAAGAGGGAGCCCTCCTGCAACGTTCTGCGT13.4482758620689653No Hit
TCCACGGGGTCGGAGTTGACCCTGCCGACGGCAGCACGGTCGTCGCAGGC13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)