FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003643271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGGAGAACGAGGCGGCGTCGCGCGAGATGGAGACGGGATCCGAGCGGGT38.333333333333332No Hit
CTTGATAGGAGTTTGACCTAAATATATCTTGCTCACAGTTCCATCTTCAT38.333333333333332No Hit
GAGTTGCTCCACATGCGCCGGGCTCATCACTTTGTGCTGTCCTCTACCAA38.333333333333332No Hit
GGCACGGGATCATCCTGCCGTATCAGATGGATGGCGTGCCGGGCATCAGC25.555555555555555No Hit
ATATCACGCTGCGCATGACGCGCGCCGAGATCGGCAACTACCTGGGCATG25.555555555555555No Hit
CCTGAACATCTGATCAAAAGGAAGGAACAGCAATGGATGGGGAGTGAGGA12.7777777777777777No Hit
CTCTGGCATTTGACGAGTACGCGCTCAGTGCCGGTGCCGACATATACAGG12.7777777777777777No Hit
AGCGAGTCTCCGCGTGCGCGAGCGCCGCACACAGGAATAGACCCGCAAGA12.7777777777777777No Hit
CTCTATCTCTAGAGCGGTCAGAGGGATGTCAAGACCTGGTAAGGTTCTTC12.7777777777777777No Hit
CTTCGCGCGCAGCGCCCGCATCTACGACGGGCCCGACGAGGTCCACCGCC12.7777777777777777No Hit
GTGGATATTTGTCTAGCTTTGAGGATTTCGTTGGAAACGGGATTACATAT12.7777777777777777No Hit
GATTGCAGGAGTCCATAATGGGAATGTAGACCACTGGAGGCCACTCACTT12.7777777777777777No Hit
GAGCTACCACGGAGGAGTTGAGTGGTTGTGACAGAGACTGTCCGTATGAC12.7777777777777777No Hit
CGCTAACTACTCCGGGGTGTTTGCATTCTGACTGCAGATTCCTAACAAGG12.7777777777777777No Hit
CTCCCGAGTAGCTGGGACTACAGGCATGTGCCACCACGCCTGGCTAATTT12.7777777777777777No Hit
ACTCAATACGTCTGACCTCACCTCCTACTGGCCTTCCCCTCACTCATACC12.7777777777777777No Hit
GTCGCCCAGGCTGGAGTACAGTGGCGCAGTCTCGGCTCACTGCAACCTCC12.7777777777777777No Hit
GCATCAGTTCTTCCCCTTGAACAGGCCACCCAGCCTGCGCTTGTAGGCGG12.7777777777777777No Hit
CGCCATTCTCGACATCAACGCCGGCAACTACCGCACCTTCCGCACATGGC12.7777777777777777No Hit
GTTCGTGACACTGCCCCACATGTCTGGTCGAGTGTGGTCTCCGCGGCGTC12.7777777777777777No Hit
TCCGCGCAGATTAATCGAACGGTAGTTGCCGTCCACCGCGTCGAAACCGG12.7777777777777777No Hit
TTACGGCACCATGTCAACGAACCTATCCCGCCGCTCCTTCATGCGGGGCC12.7777777777777777No Hit
GCCGTAGCCCAGCTGATCGACACGCCCGAGGGCGATGCGCGCGACGCGAT12.7777777777777777No Hit
AGATCACGCTGCGCATGACGCGCGCCGAGATCGGCAACTACCTGGGCATG12.7777777777777777No Hit
GTGTAGCCTCTGGCAAGTGCAGAGCCACTTTGCAGCTCCCTGGCAATGGA12.7777777777777777No Hit
CTGGTGGTGGCCTGGGTGCGTCGTCGCGTCCTCAACCCCTACACCGACGT12.7777777777777777No Hit
GCCATCGATAGTCGCAACGGCGACATTGCCGTTAATTGTGCCGGTATTTG12.7777777777777777No Hit
AGTTCTACAGGACTAAGCCCTCTAATTCCTGGCAAGCAACCACTTCTCCA12.7777777777777777No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)