FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003643292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGATCACGTTCCATGCTTCGATCCCTCTGGGCAGGCGACGTCGGGCAT23.4482758620689653No Hit
GCCATCGAGGGCCTGAACGGCGCGGGAATCGGTGCGGTCCACGCTGGTGA23.4482758620689653No Hit
GCCTCAAAGAGGTCCAAATATCCACTTGCAGATTTCAAGCGCTTCTAGGC23.4482758620689653No Hit
GCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGTAC23.4482758620689653No Hit
AGCGATTCCTGGCTACTTGAGTGGCTGAGGTGAGAGGTTCACTTGAGCCC11.7241379310344827No Hit
GGTTGTAGAAGATGAAGTCGTCGTCGGAGCGCACCTTGCCGTCGGCGGTG11.7241379310344827No Hit
CAAGTGGTCGGGCCACTGATCAAGGCGGTGGATGCAATGAACGATGACGA11.7241379310344827No Hit
CTACGCCTACATTGCGCAAGGCCGATTGGTGCTCTCCGGCGTCGATCATT11.7241379310344827No Hit
CATCACCAATGCTGCCATCTTGCTGATGTAAGCCTTTTTTCTCCAACAAA11.7241379310344827No Hit
GGTCTGGGCAGGTGGACCCGCATGCGGCACGGCCGCATCGCCGGTCCCCA11.7241379310344827No Hit
AGTCCATTCAATGATTCCATTAGATTCCATTCGATGATGATTCCATTCGA11.7241379310344827No Hit
ATTCCATTCGATTCCATTCGATGATGATTCCATTCCAGTCCATATGATCA11.7241379310344827No Hit
GTCGGCCAGGCGCGTGCGCAGGGCGACATCACCTACGTCGCGGACGACAA11.7241379310344827No Hit
GAGGTTGGTATAAGAGTTTGAAAGGTGTTGTCTGATTTCAGAAGCCTTTT11.7241379310344827No Hit
GCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCACA11.7241379310344827No Hit
GCTGTAAAGAATACTCCCCAAGACTGGGTAATTTATAAAGAAAAGAAGTC11.7241379310344827No Hit
CCATCGGCCCGTAGATCGACTGGGTGTGCGCATCGCCCGTCACGGCCAGC11.7241379310344827No Hit
TATCAACGCAGAGTACATGGGACATTAAGGAAGAGTTTCCCACAATAAAA11.7241379310344827No Hit
ATCATCTAGGTGTATAATGGTAACACTGAGTCTCCCTAGTAACAAAAAAG11.7241379310344827No Hit
GCGATGGTGTCAGGCCGGTTCAGCGGTCTCCTGCTGCTTCGGCACCTCGA11.7241379310344827No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTT11.7241379310344827No Hit
AGGCTATTAAAGAGTTAGCACCCACCATTGGATGAAGCCCAGGATAAGTG11.7241379310344827No Hit
AGCCCCGGCACGGCATGCCGTCCTTCCGGCAGGTGCTCCAGGGCGTGCGG11.7241379310344827No Hit
GTAAAAGCCGGAGTCCTCCAGGGCATGCAAGGCGACCGACCTGTCTCTTA11.7241379310344827No Hit
CCCCCGGAGCCCCGCGGACGCTACGCCGCGACGAGTAGGAGGGCCGCTGC11.7241379310344827No Hit
CCTGTGGCAGAAAAAAAAAAAAAACCGCACCACGGAGAAGCAGAGCCTGG11.7241379310344827No Hit
AATCATAGCAGAATGACTGCAGCCAGCTCTTTGGCGATTTCTTCTACCCA11.7241379310344827No Hit
GGCTTCTCCGCCGGCGCAATGACCCCGTGTGTCACCGCCCTGGCAGGTGG11.7241379310344827No Hit
GTCCCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAGCCTCC11.7241379310344827No Hit
GGCCACGCGCTACGTGCTGCCCGTGCTGGCACCCGATGGCGCCACGGGCA11.7241379310344827No Hit
GTGGTAAAATGAGCGGAGATAAATGAAAAGACTTCTGGAATGGGCCCATG11.7241379310344827No Hit
CTTAGAGAGAGTGTCACTTGAGCTTAGTTTTGCTAGCATTTAGTTAGGCA11.7241379310344827No Hit
CCGGTTGTACAGCGCGATGCCGTGCTTCAGGCCGTGCTCGGTGAGCCGCG11.7241379310344827No Hit
GGGATGATCCGGCCGGAAACAGTCTGCCCGCCAGCGGCAGGGGCGTACTC11.7241379310344827No Hit
CTATGGAGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGG11.7241379310344827No Hit
CTGCAACCACCTCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCT11.7241379310344827No Hit
CACGTAGCCGAGGCCAAGGATCCCGAGTCGCTTGTTGAAACCCTCACGAT11.7241379310344827No Hit
GAGCCCCCCTTGCTGTCGGCGTTGACAGTGCGGATGGTGCCGTCCTCGAA11.7241379310344827No Hit
CCTGAGGTCAGGAGTTCGAGATCAGCCTGGCCAACATGGTGAAACCCCGT11.7241379310344827No Hit
CGACCTCAACCTCGTCAACATGGCGCCATTCAACAACCTCATCCCCGAGA11.7241379310344827No Hit
ACGGTGCACCTTCATGAGCCTGCACGGCACCCGACGGCATACGCACACCA11.7241379310344827No Hit
GTCGAACACACAATATGGCGTTCTGGCTGGCTTGACGGTCTATGCCGTGC11.7241379310344827No Hit
GTATTCTTCCACTCCACTGATGTTGGGCTTGGCCATGTCTGTCTCTTATA11.7241379310344827No Hit
GAAGAAAGCACCGGCCACGAAGTCGGCGCGCGCCTGGGCGACAAGCATCT11.7241379310344827No Hit
GACTATGGCAGGGGCAGGGGTTCCTTTCTCTGCCAATGGAAGGCCTCTGG11.7241379310344827No Hit
ATCCTGCGTAATCAACGCCGCAACTTTACGTCGGATTAGCTCTTCTTTGA11.7241379310344827No Hit
CCATCAAACAGGCTTTGTGTGAGCAACATGGCTGTTTATTTCACCTGGGT11.7241379310344827No Hit
GCGGCTGGTGGTGGCCACCAACGAGAACGACGTGCTGGACCTGTCTCTTA11.7241379310344827No Hit
CCATTGCACTCCAGCCTGGTGACAGAGTGAGACTGCGTCTCAAAAAAAAA11.7241379310344827No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGT11.7241379310344827No Hit
TCTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGA11.7241379310344827No Hit
TATCAACGTCGTCTCGGCATCTGCGGTGTCGTCGATGTCCGACCACCCTG11.7241379310344827No Hit
GCGCAGCGCCCTCTCGACGAAGTCGAGGCGATCCTGCCCCCAGAATATTT11.7241379310344827No Hit
ACTGAAATCTCCGCCTCCAGGGTTCAAGAGATTCTCCTGCCTCAGCCTCC11.7241379310344827No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)