FastQCFastQC Report
Tue 10 May 2022
EGAF00003643389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences238191
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA2700.11335440885675782No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA2450.10285863025890987No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA2420.1015991368271681No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)