FastQCFastQC Report
Tue 10 May 2022
EGAF00003643540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences905565
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT9290.10258788712019568No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG9260.10225660223175588No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA9210.10170446075102285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)