FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003643682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCCAGCATCTAGACAAGTGCCAGATACAATTTACATTTGTGCTGACT36.976744186046512No Hit
CTGTAAGAACTTGCTTTATGAATCTTAGTGCTCCTGTGTTGGGCATGTAT36.976744186046512No Hit
AAGCTGAAGCATGAGAATCACTTGAACCTGGGAAGCAGAGGTCCCAGTGA24.651162790697675No Hit
CTCTCGGGGTCATAACTCTCTCTGCCCCCTTCCTCCTAGTCCCCAGGGTT24.651162790697675No Hit
GTCCGGTTCGTGCGGATGCACGACAACCGCGAAGCCGAAGCTCGAAGGCT12.3255813953488373No Hit
AAATATGGAAGCAACTTTGCAACTGGGTAACAGGCAGAGGTTGGAACAGT12.3255813953488373No Hit
GCAGTAATTCCACGGGAGTAGGAAGAACTCTGTTTTTTAAGATTTGAAAT12.3255813953488373No Hit
ATACATATGAGCTGTAAACAGCTGGAGCACGATGATAAAGCAGCACTGAA12.3255813953488373No Hit
GGTCAGTGGAGGGAAATCAACTAAGAGGAAACATTGGGGTAAGGAAGAAT12.3255813953488373No Hit
GTGTCATATATGTCACTGTCCTTTGAGTGTTACACGTTTAAGGAACAGTT12.3255813953488373No Hit
CTGAGACATCGTCAATCCTTCTGCCGAATCCTTCAATGAGTTTGGTTGAC12.3255813953488373No Hit
CATTGTAGCCCGCACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGA12.3255813953488373No Hit
AGGCCTGGCTCCCGCCCCACGAGGACACCTTGCAGTCGGTGGTGTTGCCG12.3255813953488373No Hit
TCACAGGCACATGCCACGACGCCGGGCTAATTTTTGTATTTTTTGTAGAG12.3255813953488373No Hit
CTTCAACCCCTTGGCTTTTCATGGGAAAAAGGGCAGGGGTCGGTTTGGAT12.3255813953488373No Hit
TTTTAATGGGGTGTTGAATTAGGTTTCCTAGTATTTTATTGAGGATTTTT12.3255813953488373No Hit
CTATTACTCCAGGCTGGGCACTGGCAGCTGAGGGTGCAGGAACTGTGAGG12.3255813953488373No Hit
CCACGTCGCCCTGCGTCACGGCCCAGTTGAAGCCCACGTTGGTGAAGCCT12.3255813953488373No Hit
CATCCAGAATGGGCAAATCTATAAAGACAGAAAGTGGGCTGGGCACCGTG12.3255813953488373No Hit
GTCTCTCACCTAATCCATCTTTCATTTCAAATATCAATTTGCTTAGCAAA12.3255813953488373No Hit
GGCTGGCAGCGGATTTGGCAACCGGACCGGCTTCGCTCTTGATCTGCGCC12.3255813953488373No Hit
TGTAGTAGGTTCCTGTTGAGTATCTGTTGAATGAATGAATGGATAAGTTG12.3255813953488373No Hit
GCCCTGCCCCGTGATGATGGCCACCCCCAGCCTGGGCAGGCCTTGCTCTG12.3255813953488373No Hit
GTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAG12.3255813953488373No Hit
CACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTT12.3255813953488373No Hit
TCTGTCAGATTAATTCCCTCTAGGAATTTCCCCCAAGAGAATCAAGCATC12.3255813953488373No Hit
GCATACCTTAAGTCTCACAGATATCTCTAGCATTGGAATGCCTGGGGTAT12.3255813953488373No Hit
GGCCTCAACTACGTGGCCTACGGCCTGATCGCCCGCGAAGTCGAGCGCGT12.3255813953488373No Hit
ATCTTAACCCTCAAGTGCCAGCGTAGTGATGAGGAAAGGCTGGCCTGGTG12.3255813953488373No Hit
GCTCTTACAGGGCCAGTCTGAGATGGCTTAAGGGACTTCCAGGGGAGGTG12.3255813953488373No Hit
CAGTAGTTATTGTTAAAATCAGCTGCACTAGATACAATTTGAAAATATCC12.3255813953488373No Hit
GGATTGCAGAGGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTG12.3255813953488373No Hit
GATCGTCGCAGACCATGCGGACGGCGCGCACGGCGACCAGATCCCGATGT12.3255813953488373No Hit
GCCTCATAGCATACCCTCAGAGATGTCATCTCTCACTGGCCAAGTCCTTT12.3255813953488373No Hit
GCATAAAAGCTTGCTCCATTTTTTAGTAGCTGTGCATATTCTGCTTTATG12.3255813953488373No Hit
GTTCTCATGGCACCAAATGACTCCCTCTGCCCTGGAACGGAGACCAGACC12.3255813953488373No Hit
GTATTTTTATTTCACGTTAGCTATTGTGGAGTTTAGGGAATCTGAATAAA12.3255813953488373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)