FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003643743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCGCATCGCCGG27.142857142857142No Hit
GATCTATTTCTGTTCGCCAGCCTGTGTCGCCCGCTTTGATGCGGCGCCGC27.142857142857142No Hit
GCTTCACCTTGCCCAACACTTCCTCGGAACTGGCGATCCTGGCAGGCACC13.571428571428571No Hit
GGCTCTCATCGTCTCCCACCAACTGCCGATTTGGATTGCGCGCTGCGCAG13.571428571428571No Hit
GGATGCCCTCGACGAGCAGGGGGTTCTCCGCGAGGATGTCCCCCTCGCTC13.571428571428571No Hit
TTGCGGATCAGGCCGCTGGTTAGCAGGTCCATGGCAAGCTGGTCTCCCGG13.571428571428571No Hit
TTCATGTCCCGCATAATCCTCATTTGAAGAATCAATTAAATGCAGAATTA13.571428571428571No Hit
GGTGGAGAGTTCACTGAACTTGTCCCAGAGGTCAATGTCCAGAGAGACAC13.571428571428571No Hit
TATTACTTCTGCTCGGCCGGATGCCGCGCGAAGTTCCTGGCCGAGCCGGA13.571428571428571No Hit
AGTTAGGACCCTCAGCTGCAGGTCTGTTGGAGTTTACTGGAGGTCCACTC13.571428571428571No Hit
GTGAAGGACATCGCGCCGCAGAAGATCGACGCGAACACCGTCAAGGGCGG13.571428571428571No Hit
CGGCTATACAAACGCAGGGAAATCAACATGGTTCAACCGCCTGACGAGTG13.571428571428571No Hit
GAAGAAGATGAACACTTCGATGACACAGTGGTTTGTCTTGATACTTATAA13.571428571428571No Hit
GCTGCGGGCAGGCCGCGCGCGTCGGCCCATTCGGCGGTCGCGGCGATGTA13.571428571428571No Hit
CGCTGTCGGGGATCAACTCGCCCCGGCTGGTGTTCCTGACCTTCGTCAAC13.571428571428571No Hit
TTCGTCACCAGCCAGCTGCACTTGGTCTGGTGCTGACATTCCTCCAGGGT13.571428571428571No Hit
GTGAACGCCTTCTCGAAGAACGGCGGCCCCACCGACAGCTTCCGCCCGGT13.571428571428571No Hit
CTCCAGCTAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCTGCA13.571428571428571No Hit
GCTTTACGACATCGACCCGCAGGCGACCGCCAAGGCGGCCCGAAACCTGT13.571428571428571No Hit
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATATGCGTTGTTAAC13.571428571428571No Hit
TTTATGAACTAGCCTATCGCAGACGGTATCAACAGGAACATCCTCGTGTT13.571428571428571No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG13.571428571428571No Hit
TATTACTTCTGCTCGGCCGGATGCCGCGCGAAGTTCCTGGCCGGGCCGGA13.571428571428571No Hit
CTTCTGGTCGCCGGGGTCGGCGCCCTGCGCACGCAGTGTCTTCTGCAGCT13.571428571428571No Hit
GGATTTCCACCGGGCCACCCTGATCGTAGAGTGGGGTACTGCAGGAACTG13.571428571428571No Hit
GCCAAGGCCCACCTAAAGTATGCTGCAAACATATGCAGATCCCCTGAGAC13.571428571428571No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)