FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003643761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTTGCTTTTTCATGTTTGCTGACACTTCCTCCATGGCCCATCTATCGC210.0No Hit
GGGGTGCCCCGGGCGTGGGGGGGGCGGCGGCGCCTCGTCCAGCCGCGGCG210.0No Hit
GCTGTAAAGAGGGGCGTTGAGTCCGTCCGACTTCACTGCCCCCTTTCAGC15.0No Hit
CAACGCAGAGTACATGGGGGCATCGCGCTGGCACACGTCGGAGCGGGCCT15.0No Hit
GGGAGAGGCCGAGCTGACTGGCGGTATTGATCCGTCTGGAAAAACAACTT15.0No Hit
ATAAGGGGCTTTTGGACAGATTTCGGGTCCTGAGGTACCTCGCGTGTCGT15.0No Hit
GTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT15.0No Hit
GCGGCCTGGCGCCTGCCTCCGCGGATATCCGCTATCACTACGTGCAGGCA15.0No Hit
CGTAAAGACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGC15.0No Hit
GTTGTACACTTCACCACAAATACAGAGAAGCTTCAAAAACTGAAGCTCGA15.0No Hit
GGAAGGGGGTCATGGTAGACACAGAGGTGGACTGTTTCTCTACCTCCTCA15.0No Hit
GTCGGTAAGAGCCTTAACGGCCTCGTTGGTCTGGGCCTCAGTGAGCGAGG15.0No Hit
CTAAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAACTAGTTAGC15.0No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA15.0No Hit
GCTTACATGTCTCGATCCCACTTAACTATCTTGGGCTGTGACAAAGTCAC15.0No Hit
CACGAACACAGACACATGCAGGTGCCTTTGCAGAAACAAAGTCAGGGTTC15.0No Hit
GTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCC15.0No Hit
ACTCCAACGTGGAGAACCTACCCCCGCACATCATCCGCCTGGTGTACAAG15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)