FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003643762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCATACTTGTGTGTTCTGTTCCCCATCTCAGAGCAAGATTATGAAGAG210.0No Hit
GCTCTCGCTGGCCCTTGAAAATCCGGGGGAGAGGGTGTAAATCTCGCGCC210.0No Hit
GTATTACTTTCTCCGCTCAGCTGCTGCTCCACTAGATCGATTGGCGCTGT15.0No Hit
TCACCAGGCTGCCATCGCTGAGCTGCCAATTTCCGGACGACGTATCTCGC15.0No Hit
CCTCGCGCGTGCGCGTGTTCACGCAGTGGCTGCGCGACATCTTCGAGGCC15.0No Hit
GAAGAGCTCAGATAGAAAAGGAGGGAGCTACTCTCAGGCTGCAAGCAGTG15.0No Hit
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGC15.0No Hit
CTTCAGCAATGCGCGCGCTTCTTCTTCCTGCGAGAATCCCTTGGTATTGA15.0No Hit
GCCTGAGACAGCTGCCTTGTGTGCGACTGAGATGCACAGCTGCCTTGTGT15.0No Hit
AAGGTGTAAAGCTTTAAGAGTCATTTATATAAAATGTTTAATCTCTGCTG15.0No Hit
TCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGT15.0No Hit
ACACTTACCATGTTACGACTTGTCTCCTCTATATAAATGCGTAGGGGTTT15.0No Hit
TTCTTGGAGCATCCCTCTCCTGAGCACAACCCCAGGGGCACAGCCCAGAG15.0No Hit
GCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAAC15.0No Hit
TCTCTTTCTTGCTCAGCATGGATTAATTTTAATGCCTCTATTCCATCTTC15.0No Hit
GATGTGTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAG15.0No Hit
TTTCTGGCCTGGAGGCTATCCAGCGTACTCCAAAGATTCAGGTTTACTCA15.0No Hit
CGCTGGGCCCGCCGGCGCCCCCGTGGATCTCTGTGAGCAGACGGGCCCGA15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)